Package psidev.psi.mi.jami.bridges.fetcher.mock

Class MockOrganismFetcher

java.lang.Object

psidev.psi.mi.jami.bridges.fetcher.mock.AbstractMockFetcher<Organism>

psidev.psi.mi.jami.bridges.fetcher.mock.MockOrganismFetcher

All Implemented Interfaces:

MockFetcher<Organism>, OrganismFetcher

public class MockOrganismFetcher
extends AbstractMockFetcher<Organism>
implements OrganismFetcher

A mock fetcher for testing. It extends all the methods of the true fetcher, but does not access an external service. Instead, it holds a map which can be loaded with objects and keys. which are then returned. It attempts to replicate the responses of the fetcher in most scenarios.

Since:

24/05/13

Author:

Gabriel Aldam (galdam@ebi.ac.uk)

Field Summary

Fields inherited from class psidev.psi.mi.jami.bridges.fetcher.mock.AbstractMockFetcher

localMap

Constructor Summary

Constructors

Constructor	Description
MockOrganismFetcher()

Method Summary

Modifier and Type	Method	Description
Organism	fetchByTaxID(int taxID)	Finds the complete organism record matching the provided TaxID number.
Collection<Organism>	fetchByTaxIDs(Collection<Integer> taxIDs)	Finds the complete organism records matching the provided TaxID numbers.

Methods inherited from class psidev.psi.mi.jami.bridges.fetcher.mock.AbstractMockFetcher

addEntry, clearEntries, getEntry, removeEntry

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MockOrganismFetcher

public MockOrganismFetcher()

Method Detail

fetchByTaxID

public Organism fetchByTaxID(int taxID)
                      throws BridgeFailedException

Finds the complete organism record matching the provided TaxID number.

Specified by:

fetchByTaxID in interface OrganismFetcher

Parameters:

taxID - The taxID to search for

Returns:

A matching organism, or null if one could not be found.

Throws:

BridgeFailedException - if any.

fetchByTaxIDs

public Collection<Organism> fetchByTaxIDs(Collection<Integer> taxIDs)
                                   throws BridgeFailedException

Finds the complete organism records matching the provided TaxID numbers.

Specified by:

fetchByTaxIDs in interface OrganismFetcher

Parameters:

taxIDs - A collection of taxIDs to search for.

Returns:

A collection of the matching organisms.

Throws:

BridgeFailedException - if any.