Package psidev.psi.mi.jami.bridges.fetcher.mock

Class OntologyTermCompositeFetcher

java.lang.Object

psidev.psi.mi.jami.bridges.fetcher.mock.CvTermCompositeFetcherTemplate<OntologyTerm,OntologyTermFetcher>

psidev.psi.mi.jami.bridges.fetcher.mock.OntologyTermCompositeFetcher

All Implemented Interfaces:

CvTermFetcher<OntologyTerm>, OntologyTermFetcher

public class OntologyTermCompositeFetcher
extends CvTermCompositeFetcherTemplate<OntologyTerm,OntologyTermFetcher>
implements OntologyTermFetcher

Ontology fetcher that delegates to different ontologyTermFetchers

Since:

18/07/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
OntologyTermCompositeFetcher()

Method Summary

Modifier and Type	Method	Description
Set<OntologyTerm>	fetchRootTerms(String databaseName)	fetchRootTerms.
Set<OntologyTerm>	fetchRootTerms(CvTerm database)	fetchRootTerms.

Methods inherited from class psidev.psi.mi.jami.bridges.fetcher.mock.CvTermCompositeFetcherTemplate

addCvTermFetcher, fetchByIdentifier, fetchByIdentifier, fetchByIdentifiers, fetchByIdentifiers, fetchByName, fetchByName, fetchByNames, fetchByNames, getDelegateFetchers, removeCvTermFetcher

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.bridges.fetcher.CvTermFetcher

fetchByIdentifier, fetchByIdentifier, fetchByIdentifiers, fetchByIdentifiers, fetchByName, fetchByName, fetchByNames, fetchByNames

Constructor Detail

OntologyTermCompositeFetcher

public OntologyTermCompositeFetcher()

Method Detail

fetchRootTerms

public Set<OntologyTerm> fetchRootTerms(String databaseName)
                                 throws BridgeFailedException

fetchRootTerms.

Specified by:

fetchRootTerms in interface OntologyTermFetcher

Parameters:

databaseName - : ontology database name

Returns:

a set of root terms for the ontology matching this database name

Throws:

BridgeFailedException - if any.

fetchRootTerms

public Set<OntologyTerm> fetchRootTerms(CvTerm database)
                                 throws BridgeFailedException

fetchRootTerms.

Specified by:

fetchRootTerms in interface OntologyTermFetcher

Parameters:

database - a CvTerm object.

Returns:

a Set object.

Throws:

BridgeFailedException - if any.