Package psidev.psi.mi.jami.bridges.obo

Class OboCvTermFetcher

java.lang.Object

psidev.psi.mi.jami.bridges.obo.OboFetcherTemplate<CvTerm>

psidev.psi.mi.jami.bridges.obo.OboCvTermFetcher

All Implemented Interfaces:

CvTermFetcher<CvTerm>

public class OboCvTermFetcher
extends OboFetcherTemplate<CvTerm>
implements CvTermFetcher<CvTerm>

Simple fetcher based on OBO files

Since:

17/07/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
OboCvTermFetcher(String databaseName, String filePath)	Constructor for OboCvTermFetcher.
OboCvTermFetcher(CvTerm database, String filePath)	Constructor for OboCvTermFetcher.

Method Summary

Methods inherited from class psidev.psi.mi.jami.bridges.obo.OboFetcherTemplate

fetchByIdentifier, fetchByIdentifier, fetchByIdentifiers, fetchByIdentifiers, fetchByName, fetchByName, fetchByNames, fetchByNames, getId2Term, getName2Term, getOntologyDatabase, initialiseLocalMaps

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.bridges.fetcher.CvTermFetcher

fetchByIdentifier, fetchByIdentifier, fetchByIdentifiers, fetchByIdentifiers, fetchByName, fetchByName, fetchByNames, fetchByNames

Constructor Detail

OboCvTermFetcher

public OboCvTermFetcher(CvTerm database,
                        String filePath)

Constructor for OboCvTermFetcher.

Parameters:

database - a CvTerm object.

filePath - a String object.

OboCvTermFetcher

public OboCvTermFetcher(String databaseName,
                        String filePath)

Constructor for OboCvTermFetcher.

Parameters:

databaseName - a String object.

filePath - a String object.