Package psidev.psi.mi.jami.bridges.ols

Class OlsCvTermFetcher

java.lang.Object

psidev.psi.mi.jami.bridges.ols.AbstractOlsFetcher<CvTerm>

psidev.psi.mi.jami.bridges.ols.OlsCvTermFetcher

All Implemented Interfaces:

CvTermFetcher<CvTerm>

public class OlsCvTermFetcher
extends AbstractOlsFetcher<CvTerm>

Created with IntelliJ IDEA.

Since:

08/05/13

Author:

Gabriel Aldam (galdam@ebi.ac.uk)

Field Summary

Fields inherited from class psidev.psi.mi.jami.bridges.ols.AbstractOlsFetcher

dbMap, olsClient

Constructor Summary

Constructors

Constructor	Description
OlsCvTermFetcher()	Constructor for OlsCvTermFetcher.

Method Summary

Modifier and Type	Method	Description
protected CvTerm	instantiateCvTerm(String termName, Xref identity, String ontologyName)	instantiateCvTerm.

Methods inherited from class psidev.psi.mi.jami.bridges.ols.AbstractOlsFetcher

createXref, fetchByIdentifier, fetchByIdentifier, fetchByIdentifiers, fetchByIdentifiers, fetchByName, fetchByName, fetchByNames, fetchByNames, initialiseDbMap

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

OlsCvTermFetcher

public OlsCvTermFetcher()
                 throws BridgeFailedException

Constructor for OlsCvTermFetcher.

Throws:

BridgeFailedException - if any.

Method Detail

instantiateCvTerm

protected CvTerm instantiateCvTerm(String termName,
                                   Xref identity,
                                   String ontologyName)

instantiateCvTerm.

Specified by:

instantiateCvTerm in class AbstractOlsFetcher<CvTerm>

Parameters:

termName - a String object.

identity - a Xref object.

ontologyName - a String object.

Returns:

a T object.