BuildBindingSitesCliqueGraph (PSI :: JAMI - Java framework for molecular interactions 3.3.0 API)

java.lang.Object
- psidev.psi.mi.jami.examples.core.BuildBindingSitesCliqueGraph

```
public class BuildBindingSitesCliqueGraph
extends Object
```
In this code example, we can build a clique graph of binding sites in an interactions. An example of this use case is for writing inferred interactions in PSI-XML standard formats. For instance, an interaction I1 has 3 participants P1, P2 and P3. P1 has two features F1 and F2, P2 has one feature F3 and P3 has one feature F4 We know that F1 has two linked features F3 and F4, F2 binds to F3, F3 binds to F1, F4 and F2 and F4 binds to F1, F3 The clique graph would give two sets of binding features: - F1,F4,F3 - F3, F2
Since:
```
09/02/15
```
Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors
Constructor Description

BuildBindingSitesCliqueGraph()

Method Summary

All Methods Static Methods Concrete Methods
Modifier and Type	Method	Description
`protected static Interaction`	`createInteractionWithLinkedFeatures()`	createInteractionWithLinkedFeatures.
`static void`	`main(String[] args)`	main.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - BuildBindingSitesCliqueGraph
```
public BuildBindingSitesCliqueGraph()
```
- Method Detail
  - main
```
public static void main(String[] args)
                 throws Exception
```
    main.
    
    Parameters:
    
    args - an array of String objects.
    
    Throws:
    
    Exception - if any.
  - createInteractionWithLinkedFeatures
```
protected static Interaction createInteractionWithLinkedFeatures()
```
    createInteractionWithLinkedFeatures.
    
    Returns:
    
    a Interaction object.