Package psidev.psi.mi.jami.json.elements

Class SimpleJsonExperimentWriter

java.lang.Object

psidev.psi.mi.jami.json.elements.SimpleJsonExperimentWriter

All Implemented Interfaces:

JsonElementWriter<InteractionEvidence>

public class SimpleJsonExperimentWriter
extends Object
implements JsonElementWriter<InteractionEvidence>

Json writer which will only write experimental details of an interaction evidence

Since:

18/07/14

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
SimpleJsonExperimentWriter(Writer writer)	Constructor for SimpleJsonExperimentWriter.

Method Summary

Modifier and Type	Method	Description
JsonElementWriter<Annotation>	getAnnotationWriter()	Getter for the field annotationWriter.
JsonElementWriter<CvTerm>	getCvWriter()	Getter for the field cvWriter.
JsonElementWriter<Organism>	getHostOrganismWriter()	Getter for the field hostOrganismWriter.
JsonElementWriter<Publication>	getPublicationWriter()	Getter for the field publicationWriter.
void	setAnnotationWriter(JsonElementWriter<Annotation> annotationWriter)	Setter for the field annotationWriter.
void	setCvWriter(JsonElementWriter<CvTerm> cvWriter)	Setter for the field cvWriter.
void	setHostOrganismWriter(JsonElementWriter<Organism> hostOrganismWriter)	Setter for the field hostOrganismWriter.
void	setPublicationWriter(JsonElementWriter<Publication> publicationWriter)	Setter for the field publicationWriter.
void	write(InteractionEvidence object)	write.
protected void	writeAnnotations(Collection<Annotation> expModifications)	writeAnnotations.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SimpleJsonExperimentWriter

public SimpleJsonExperimentWriter(Writer writer)

Constructor for SimpleJsonExperimentWriter.

Parameters:

writer - a Writer object.

Method Detail

write

public void write(InteractionEvidence object)
           throws IOException

write.

Specified by:

write in interface JsonElementWriter<InteractionEvidence>

Parameters:

object - a InteractionEvidence object.

Throws:

IOException - if any.

writeAnnotations

protected void writeAnnotations(Collection<Annotation> expModifications)
                         throws IOException

writeAnnotations.

Parameters:

expModifications - a Collection object.

Throws:

IOException - if any.

getCvWriter

public JsonElementWriter<CvTerm> getCvWriter()

Getter for the field cvWriter.

Returns:

a JsonElementWriter object.

setCvWriter

public void setCvWriter(JsonElementWriter<CvTerm> cvWriter)

Setter for the field cvWriter.

Parameters:

cvWriter - a JsonElementWriter object.

getPublicationWriter

public JsonElementWriter<Publication> getPublicationWriter()

Getter for the field publicationWriter.

Returns:

a JsonElementWriter object.

setPublicationWriter

public void setPublicationWriter(JsonElementWriter<Publication> publicationWriter)

Setter for the field publicationWriter.

Parameters:

publicationWriter - a JsonElementWriter object.

getHostOrganismWriter

public JsonElementWriter<Organism> getHostOrganismWriter()

Getter for the field hostOrganismWriter.

Returns:

a JsonElementWriter object.

setHostOrganismWriter

public void setHostOrganismWriter(JsonElementWriter<Organism> hostOrganismWriter)

Setter for the field hostOrganismWriter.

Parameters:

hostOrganismWriter - a JsonElementWriter object.

getAnnotationWriter

public JsonElementWriter<Annotation> getAnnotationWriter()

Getter for the field annotationWriter.

Returns:

a JsonElementWriter object.

setAnnotationWriter

public void setAnnotationWriter(JsonElementWriter<Annotation> annotationWriter)

Setter for the field annotationWriter.

Parameters:

annotationWriter - a JsonElementWriter object.