Package psidev.psi.mi.jami.tab.extension

Class MitabConfidence

java.lang.Object

psidev.psi.mi.jami.model.impl.DefaultConfidence

psidev.psi.mi.jami.model.impl.DefaultModelledConfidence

psidev.psi.mi.jami.tab.extension.MitabConfidence

All Implemented Interfaces:

FileSourceContext, Confidence, ModelledConfidence

public class MitabConfidence
extends DefaultModelledConfidence
implements FileSourceContext

A MitabConfidence is a confidence with some text

Since:

10/06/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Field Summary

Fields inherited from interface psidev.psi.mi.jami.model.Confidence

AUTHOR_BASED_CONFIDENCE, AUTHOR_BASED_CONFIDENCE_MI

Constructor Summary

Constructors

Constructor	Description
MitabConfidence(String type, String value, String text)	Constructor for MitabConfidence.
MitabConfidence(CvTerm type, String value)	Constructor for MitabConfidence.
MitabConfidence(CvTerm type, String value, String text)	Constructor for MitabConfidence.

Method Summary

Modifier and Type	Method	Description
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
String	getText()	Getter for the field text.
void	setSourceLocator(FileSourceLocator sourceLocator)	Sets the source locator
String	toString()

Methods inherited from class psidev.psi.mi.jami.model.impl.DefaultModelledConfidence

getPublication, setPublication

Methods inherited from class psidev.psi.mi.jami.model.impl.DefaultConfidence

equals, getType, getValue, hashCode

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.model.Confidence

getType, getValue

Constructor Detail

MitabConfidence

public MitabConfidence(CvTerm type,
                       String value)

Constructor for MitabConfidence.

Parameters:

type - a CvTerm object.

value - a String object.

MitabConfidence

public MitabConfidence(CvTerm type,
                       String value,
                       String text)

Constructor for MitabConfidence.

Parameters:

type - a CvTerm object.

value - a String object.

text - a String object.

MitabConfidence

public MitabConfidence(String type,
                       String value,
                       String text)

Constructor for MitabConfidence.

Parameters:

type - a String object.

value - a String object.

text - a String object.

Method Detail

getText

public String getText()

Getter for the field text.

Returns:

a String object.

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Returns:

a FileSourceLocator object.

setSourceLocator

public void setSourceLocator(FileSourceLocator sourceLocator)

Sets the source locator

Specified by:

setSourceLocator in interface FileSourceContext

Parameters:

sourceLocator - : the file locator

toString

public String toString()

Specified by:

toString in interface FileSourceContext

Overrides:

toString in class DefaultConfidence

Returns:

the file source context as a String. If the source locator is not null, it should give the source locator properties