MitabInteractor (PSI :: JAMI - Java framework for molecular interactions 3.3.0 API)

java.lang.Object
- psidev.psi.mi.jami.model.impl.DefaultInteractor
- - psidev.psi.mi.jami.tab.extension.MitabInteractor

All Implemented Interfaces:

FileSourceContext, Interactor
```
public class MitabInteractor
extends DefaultInteractor
implements FileSourceContext
```
Mitab extension for interactor. It contains a FileSourceLocator
Since:
```
11/06/13
```
Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Field Summary
- Fields inherited from interface psidev.psi.mi.jami.model.Interactor
  UNKNOWN_INTERACTOR, UNKNOWN_INTERACTOR_MI

Constructor Summary

Constructors
Constructor	Description
`MitabInteractor(String name)`	Constructor for MitabInteractor.
`MitabInteractor(String name, String fullName)`	Constructor for MitabInteractor.
`MitabInteractor(String name, String fullName, CvTerm type)`	Constructor for MitabInteractor.
`MitabInteractor(String name, String fullName, CvTerm type, Organism organism)`	Constructor for MitabInteractor.
`MitabInteractor(String name, String fullName, CvTerm type, Organism organism, Xref uniqueId)`	Constructor for MitabInteractor.
`MitabInteractor(String name, String fullName, CvTerm type, Xref uniqueId)`	Constructor for MitabInteractor.
`MitabInteractor(String name, String fullName, Organism organism)`	Constructor for MitabInteractor.
`MitabInteractor(String name, String fullName, Organism organism, Xref uniqueId)`	Constructor for MitabInteractor.
`MitabInteractor(String name, String fullName, Xref uniqueId)`	Constructor for MitabInteractor.
`MitabInteractor(String name, CvTerm type)`	Constructor for MitabInteractor.
`MitabInteractor(String name, CvTerm type, Organism organism)`	Constructor for MitabInteractor.
`MitabInteractor(String name, CvTerm type, Organism organism, Xref uniqueId)`	Constructor for MitabInteractor.
`MitabInteractor(String name, CvTerm type, Xref uniqueId)`	Constructor for MitabInteractor.
`MitabInteractor(String name, Organism organism)`	Constructor for MitabInteractor.
`MitabInteractor(String name, Organism organism, Xref uniqueId)`	Constructor for MitabInteractor.
`MitabInteractor(String name, Xref uniqueId)`	Constructor for MitabInteractor.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`FileSourceLocator`	`getSourceLocator()`	Getter for the field `sourceLocator`.
`void`	`setSourceLocator(FileSourceLocator sourceLocator)`	Sets the source locator
`String`	`toString()`

Methods inherited from class psidev.psi.mi.jami.model.impl.DefaultInteractor
getAliases, getAnnotations, getChecksums, getFullName, getIdentifiers, getInteractorType, getOrganism, getPreferredIdentifier, getPreferredName, getShortName, getXrefs, initialiseAliases, initialiseAliasesWith, initialiseAnnotations, initialiseAnnotationsWith, initialiseChecksums, initialiseChecksumsWith, initialiseIdentifiers, initialiseIdentifiersWith, initialiseXrefs, initialiseXrefsWith, setFullName, setInteractorType, setOrganism, setShortName

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

MitabInteractor

public MitabInteractor(String name,
                       CvTerm type)

Constructor for MitabInteractor.

Parameters:: name - a String object.; type - a CvTerm object.

MitabInteractor

public MitabInteractor(String name,
                       String fullName,
                       CvTerm type)

Constructor for MitabInteractor.

Parameters:: name - a String object.; fullName - a String object.; type - a CvTerm object.

MitabInteractor

public MitabInteractor(String name,
                       CvTerm type,
                       Organism organism)

Constructor for MitabInteractor.

Parameters:: name - a String object.; type - a CvTerm object.; organism - a Organism object.

MitabInteractor

public MitabInteractor(String name,
                       String fullName,
                       CvTerm type,
                       Organism organism)

Constructor for MitabInteractor.

Parameters:: name - a String object.; fullName - a String object.; type - a CvTerm object.; organism - a Organism object.

MitabInteractor

public MitabInteractor(String name,
                       CvTerm type,
                       Xref uniqueId)

Constructor for MitabInteractor.

Parameters:: name - a String object.; type - a CvTerm object.; uniqueId - a Xref object.

MitabInteractor

public MitabInteractor(String name,
                       String fullName,
                       CvTerm type,
                       Xref uniqueId)

Constructor for MitabInteractor.

Parameters:: name - a String object.; fullName - a String object.; type - a CvTerm object.; uniqueId - a Xref object.

MitabInteractor

public MitabInteractor(String name,
                       CvTerm type,
                       Organism organism,
                       Xref uniqueId)

Constructor for MitabInteractor.

Parameters:: name - a String object.; type - a CvTerm object.; organism - a Organism object.; uniqueId - a Xref object.

MitabInteractor

public MitabInteractor(String name,
                       String fullName,
                       CvTerm type,
                       Organism organism,
                       Xref uniqueId)

Constructor for MitabInteractor.

Parameters:: name - a String object.; fullName - a String object.; type - a CvTerm object.; organism - a Organism object.; uniqueId - a Xref object.

MitabInteractor
```
public MitabInteractor(String name)
```
Constructor for MitabInteractor.

Parameters:

name - a String object.

MitabInteractor

public MitabInteractor(String name,
                       String fullName)

Constructor for MitabInteractor.

Parameters:: name - a String object.; fullName - a String object.

MitabInteractor

public MitabInteractor(String name,
                       Organism organism)

Constructor for MitabInteractor.

Parameters:: name - a String object.; organism - a Organism object.

MitabInteractor

public MitabInteractor(String name,
                       String fullName,
                       Organism organism)

Constructor for MitabInteractor.

Parameters:: name - a String object.; fullName - a String object.; organism - a Organism object.

MitabInteractor

public MitabInteractor(String name,
                       Xref uniqueId)

Constructor for MitabInteractor.

Parameters:: name - a String object.; uniqueId - a Xref object.

MitabInteractor

public MitabInteractor(String name,
                       String fullName,
                       Xref uniqueId)

Constructor for MitabInteractor.

Parameters:: name - a String object.; fullName - a String object.; uniqueId - a Xref object.

MitabInteractor

public MitabInteractor(String name,
                       Organism organism,
                       Xref uniqueId)

Constructor for MitabInteractor.

Parameters:: name - a String object.; organism - a Organism object.; uniqueId - a Xref object.

MitabInteractor

public MitabInteractor(String name,
                       String fullName,
                       Organism organism,
                       Xref uniqueId)

Constructor for MitabInteractor.

Parameters:: name - a String object.; fullName - a String object.; organism - a Organism object.; uniqueId - a Xref object.

Method Detail
- getSourceLocator
```
public FileSourceLocator getSourceLocator()
```
  Getter for the field sourceLocator.
  
  Specified by:
  
  getSourceLocator in interface FileSourceContext
  
  Returns:
  
  a FileSourceLocator object.
- setSourceLocator
```
public void setSourceLocator(FileSourceLocator sourceLocator)
```
  Sets the source locator
  
  Specified by:
  
  setSourceLocator in interface FileSourceContext
  
  Parameters:
  
  sourceLocator - : the file locator
- toString
```
public String toString()
```
  Specified by:
  
  toString in interface FileSourceContext
  
  Overrides:
  
  toString in class DefaultInteractor
  
  Returns:
  
  the file source context as a String. If the source locator is not null, it should give the source locator properties