Package psidev.psi.mi.jami.tab.extension

Class MitabParameter

java.lang.Object

psidev.psi.mi.jami.model.impl.DefaultParameter

psidev.psi.mi.jami.model.impl.DefaultModelledParameter

psidev.psi.mi.jami.tab.extension.MitabParameter

All Implemented Interfaces:

FileSourceContext, ModelledParameter, Parameter

public class MitabParameter
extends DefaultModelledParameter
implements FileSourceContext

Mitab extension of Parameter

Since:

11/06/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
MitabParameter(String type, String value, String unit)	Constructor for MitabParameter.
MitabParameter(CvTerm type, String value)	Constructor for MitabParameter.
MitabParameter(CvTerm type, String value, CvTerm unit)	Constructor for MitabParameter.
MitabParameter(CvTerm type, ParameterValue value)	Constructor for MitabParameter.
MitabParameter(CvTerm type, ParameterValue value, BigDecimal uncertainty)	Constructor for MitabParameter.
MitabParameter(CvTerm type, ParameterValue value, CvTerm unit)	Constructor for MitabParameter.
MitabParameter(CvTerm type, ParameterValue value, CvTerm unit, BigDecimal uncertainty)	Constructor for MitabParameter.

Method Summary

Modifier and Type	Method	Description
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
void	setSourceLocator(FileSourceLocator sourceLocator)	Sets the source locator
String	toString()

Methods inherited from class psidev.psi.mi.jami.model.impl.DefaultModelledParameter

getPublication, setPublication

Methods inherited from class psidev.psi.mi.jami.model.impl.DefaultParameter

equals, getType, getUncertainty, getUnit, getValue, hashCode

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.model.Parameter

getType, getUncertainty, getUnit, getValue

Constructor Detail

MitabParameter

public MitabParameter(CvTerm type,
                      ParameterValue value)

Constructor for MitabParameter.

Parameters:

type - a CvTerm object.

value - a ParameterValue object.

MitabParameter

public MitabParameter(CvTerm type,
                      ParameterValue value,
                      CvTerm unit)

Constructor for MitabParameter.

Parameters:

type - a CvTerm object.

value - a ParameterValue object.

unit - a CvTerm object.

MitabParameter

public MitabParameter(CvTerm type,
                      ParameterValue value,
                      CvTerm unit,
                      BigDecimal uncertainty)

Constructor for MitabParameter.

Parameters:

type - a CvTerm object.

value - a ParameterValue object.

unit - a CvTerm object.

uncertainty - a BigDecimal object.

MitabParameter

public MitabParameter(CvTerm type,
                      ParameterValue value,
                      BigDecimal uncertainty)

Constructor for MitabParameter.

Parameters:

type - a CvTerm object.

value - a ParameterValue object.

uncertainty - a BigDecimal object.

MitabParameter

public MitabParameter(CvTerm type,
                      String value)
               throws IllegalParameterException

Constructor for MitabParameter.

Parameters:

type - a CvTerm object.

value - a String object.

Throws:

IllegalParameterException - if any.

MitabParameter

public MitabParameter(CvTerm type,
                      String value,
                      CvTerm unit)
               throws IllegalParameterException

Constructor for MitabParameter.

Parameters:

type - a CvTerm object.

value - a String object.

unit - a CvTerm object.

Throws:

IllegalParameterException - if any.

MitabParameter

public MitabParameter(String type,
                      String value,
                      String unit)
               throws IllegalParameterException

Constructor for MitabParameter.

Parameters:

type - a String object.

value - a String object.

unit - a String object.

Throws:

IllegalParameterException - if any.

Method Detail

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Returns:

a FileSourceLocator object.

setSourceLocator

public void setSourceLocator(FileSourceLocator sourceLocator)

Sets the source locator

Specified by:

setSourceLocator in interface FileSourceContext

Parameters:

sourceLocator - : the file locator

toString

public String toString()

Specified by:

toString in interface FileSourceContext

Overrides:

toString in class DefaultParameter

Returns:

the file source context as a String. If the source locator is not null, it should give the source locator properties