Package psidev.psi.mi.jami.utils

Class ChecksumUtils

java.lang.Object

psidev.psi.mi.jami.utils.ChecksumUtils

public class ChecksumUtils
extends Object

Utility class for Checksums

Since:

24/01/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
ChecksumUtils()

Method Summary

Modifier and Type	Method	Description
static Collection<Checksum>	collectAllChecksumsHavingMethod(Collection<? extends Checksum> checksums, String methodId, String methodName)	Collect all checksum having a specific method
static Collection<Checksum>	collectAllChecksumsHavingMethodAndValue(Collection<? extends Checksum> checksums, String methodId, String methodName, String value)	Collect all checksum having a specific method
static Checksum	collectFirstChecksumWithMethod(Collection<? extends Checksum> checksums, String methodId, String methodName)	This method will return the first Checksum having this methodId/method name It will return null if there are no Checksums with this method id/name
static Checksum	collectFirstChecksumWithMethodAndValue(Collection<? extends Checksum> checksums, String methodId, String methodName, String value)	This method will return the first Checksum having this methodId/method name It will return null if there are no Checksums with this method id/name
static Checksum	createChecksum(String methodName, String checksum)	createChecksum
static Checksum	createChecksum(String methodName, String methodMi, String checksum)	createChecksum
static Checksum	createRigid(String checksum)	createRigid
static Checksum	createRogid(String checksum)	createRogid
static Checksum	createSmile(String checksum)	createSmile
static Checksum	createStandardInchi(String checksum)	createStandardInchi
static Checksum	createStandardInchiKey(String checksum)	createStandardInchiKey
static boolean	doesChecksumHaveMethod(Checksum checksum, String methodId, String methodName)	To check if a checksum does have a specific method
static boolean	doesChecksumHaveMethodAndValue(Checksum checksum, String methodId, String methodName, String value)	To check if a checksum does have a specific method
static void	removeAllChecksumWithMethod(Collection<? extends Checksum> checksums, String methodId, String methodName)	Remove all Checksum having this method name/method id from the collection of checksums
static void	removeAllChecksumWithMethod(Collection<? extends Checksum> checksums, String methodId, String methodName, String value)	Remove all Checksum having this method name/method id from the collection of checksums

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ChecksumUtils

public ChecksumUtils()

Method Detail

doesChecksumHaveMethod

public static boolean doesChecksumHaveMethod(Checksum checksum,
                                             String methodId,
                                             String methodName)

To check if a checksum does have a specific method

Parameters:

checksum - the checksum

methodId - the checksum MI identifier

methodName - the checksum method name

Returns:

true if the checksum has the method with given name/identifier

collectAllChecksumsHavingMethod

public static Collection<Checksum> collectAllChecksumsHavingMethod(Collection<? extends Checksum> checksums,
                                                                   String methodId,
                                                                   String methodName)

Collect all checksum having a specific method

Parameters:

checksums - the checksums

methodId - the checksum MI identifier

methodName - the checksum method name

Returns:

the checksums having the method with given name/identifier

collectFirstChecksumWithMethod

public static Checksum collectFirstChecksumWithMethod(Collection<? extends Checksum> checksums,
                                                      String methodId,
                                                      String methodName)

This method will return the first Checksum having this methodId/method name It will return null if there are no Checksums with this method id/name

Parameters:

checksums - : the collection of Checksum

methodId - : the method id to look for

methodName - : the method name to look for

Returns:

the first checksum having this method name/id, null if no Checksum with this method name/id

removeAllChecksumWithMethod

public static void removeAllChecksumWithMethod(Collection<? extends Checksum> checksums,
                                               String methodId,
                                               String methodName)

Remove all Checksum having this method name/method id from the collection of checksums

Parameters:

checksums - : the collection of Checksum

methodId - : the method id to look for

methodName - : the method name to look for

doesChecksumHaveMethodAndValue

public static boolean doesChecksumHaveMethodAndValue(Checksum checksum,
                                                     String methodId,
                                                     String methodName,
                                                     String value)

To check if a checksum does have a specific method

Parameters:

checksum - the checksum

methodId - the checksum MI identifier

methodName - the checksum method name

value - : the checksum value

Returns:

true if the checksum has the method with given name/identifier

collectAllChecksumsHavingMethodAndValue

public static Collection<Checksum> collectAllChecksumsHavingMethodAndValue(Collection<? extends Checksum> checksums,
                                                                           String methodId,
                                                                           String methodName,
                                                                           String value)

Collect all checksum having a specific method

Parameters:

checksums - the checksums

methodId - the checksum MI identifier

methodName - the checksum method name

value - : the checksum value

Returns:

a Collection object.

collectFirstChecksumWithMethodAndValue

public static Checksum collectFirstChecksumWithMethodAndValue(Collection<? extends Checksum> checksums,
                                                              String methodId,
                                                              String methodName,
                                                              String value)

This method will return the first Checksum having this methodId/method name It will return null if there are no Checksums with this method id/name

Parameters:

checksums - : the collection of Checksum

methodId - : the method id to look for

methodName - : the method name to look for

value - : the checksum value

Returns:

the first checksum having this method name/id, null if no Checksum with this method name/id

removeAllChecksumWithMethod

public static void removeAllChecksumWithMethod(Collection<? extends Checksum> checksums,
                                               String methodId,
                                               String methodName,
                                               String value)

Remove all Checksum having this method name/method id from the collection of checksums

Parameters:

checksums - : the collection of Checksum

methodId - : the method id to look for

methodName - : the method name to look for

value - : the value

createChecksum

public static Checksum createChecksum(String methodName,
                                      String methodMi,
                                      String checksum)

createChecksum

Parameters:

methodName - a String object.

methodMi - a String object.

checksum - a String object.

Returns:

a Checksum object.

createChecksum

public static Checksum createChecksum(String methodName,
                                      String checksum)

createChecksum

Parameters:

methodName - a String object.

checksum - a String object.

Returns:

a Checksum object.

createRogid

public static Checksum createRogid(String checksum)

createRogid

Parameters:

checksum - a String object.

Returns:

a Checksum object.

createRigid

public static Checksum createRigid(String checksum)

createRigid

Parameters:

checksum - a String object.

Returns:

a Checksum object.

createStandardInchiKey

public static Checksum createStandardInchiKey(String checksum)

createStandardInchiKey

Parameters:

checksum - a String object.

Returns:

a Checksum object.

createStandardInchi

public static Checksum createStandardInchi(String checksum)

createStandardInchi

Parameters:

checksum - a String object.

Returns:

a Checksum object.

createSmile

public static Checksum createSmile(String checksum)

createSmile

Parameters:

checksum - a String object.

Returns:

a Checksum object.