Package psidev.psi.mi.jami.utils

Class ConfidenceUtils

java.lang.Object

psidev.psi.mi.jami.utils.ConfidenceUtils

public class ConfidenceUtils
extends Object

Utility class for confidences

Since:

25/03/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
ConfidenceUtils()

Method Summary

Modifier and Type	Method	Description
static Collection<Confidence>	collectAllConfidencesHavingType(Collection<? extends Confidence> confs, String typeId, String typeName)	Collect all confidences having a specific type
static Confidence	createAuthorBasedConfidence(String value)	createAuthorBasedConfidence
static Confidence	createConfidence(String typeName, String value)	createConfidence
static Confidence	createConfidence(String typeName, String typeMi, String value)	createConfidence
static boolean	doesConfidenceHaveType(Confidence conf, String typeId, String typeName)	Check the type of a confidence

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ConfidenceUtils

public ConfidenceUtils()

Method Detail

doesConfidenceHaveType

public static boolean doesConfidenceHaveType(Confidence conf,
                                             String typeId,
                                             String typeName)

Check the type of a confidence

Parameters:

conf - a Confidence object.

typeId - a String object.

typeName - a String object.

Returns:

a boolean.

collectAllConfidencesHavingType

public static Collection<Confidence> collectAllConfidencesHavingType(Collection<? extends Confidence> confs,
                                                                     String typeId,
                                                                     String typeName)

Collect all confidences having a specific type

Parameters:

confs - a Collection object.

typeId - a String object.

typeName - a String object.

Returns:

a Collection object.

createConfidence

public static Confidence createConfidence(String typeName,
                                          String typeMi,
                                          String value)

createConfidence

Parameters:

typeName - a String object.

typeMi - a String object.

value - a String object.

Returns:

a Confidence object.

createConfidence

public static Confidence createConfidence(String typeName,
                                          String value)

createConfidence

Parameters:

typeName - a String object.

value - a String object.

Returns:

a Confidence object.

createAuthorBasedConfidence

public static Confidence createAuthorBasedConfidence(String value)

createAuthorBasedConfidence

Parameters:

value - a String object.

Returns:

a Confidence object.