java.lang.Object
- psidev.psi.mi.jami.utils.CvTermUtils

```
public class CvTermUtils
extends Object
```
Utility class for CvTerms
Since:
```
05/02/13
```
Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors
Constructor Description

CvTermUtils()

Method Summary

All Methods Static Methods Concrete Methods
Modifier and Type	Method	Description
`static CvTerm`	`createAllosteryCooperativeMechanism()`	createAllosteryCooperativeMechanism
`static CvTerm`	`createAuthorAssignedName()`	createAuthorAssignedName
`static CvTerm`	`createBioactiveEntityType()`	createBioactiveEntityType
`static CvTerm`	`createBiologicalFeatureType()`	createBiologicalFeatureType
`static CvTerm`	`createCertainStatus()`	createCertainStatus
`static CvTerm`	`createChebiDatabase()`	createChebiDatabase
`static CvTerm`	`createComplexInteractorType()`	createComplexInteractorType
`static CvTerm`	`createComplexPhysicalProperties()`	createComplexPhysicalProperties
`static CvTerm`	`createComplexPortalDatabase()`	createComplexPortalDatabase
`static CvTerm`	`createComplexPortalPrimaryQualifier()`	createComplexPortalPrimaryQualifier
`static CvTerm`	`createComplexRecommendedName()`	createComplexRecommendedName
`static CvTerm`	`createComplexSynonym()`	createComplexSynonym
`static CvTerm`	`createComplexSystematicName()`	createComplexSystematicName
`static CvTerm`	`createCTerminalRangeStatus()`	createCTerminalRangeStatus
`static CvTerm`	`createCTerminalStatus()`	createCTerminalStatus
`static CvTerm`	`createDdbjEmblGenbankDatabase()`	createDdbjEmblGenbankDatabase
`static CvTerm`	`createDoiDatabase()`	createDoiDatabase
`static CvTerm`	`createECOCvTerm(String name, String ecoId)`	createECOCvTerm
`static CvTerm`	`createEnsemblDatabase()`	createEnsemblDatabase
`static CvTerm`	`createEnsemblGenomesDatabase()`	createEnsemblGenomesDatabase
`static CvTerm`	`createEntrezGeneIdDatabase()`	createEntrezGeneIdDatabase
`static CvTerm`	`createGeneInteractorType()`	createGeneInteractorType
`static CvTerm`	`createGeneNameAliasType()`	createGeneNameAliasType
`static CvTerm`	`createGeneNameSynonym()`	createGeneNameSynonym
`static CvTerm`	`createGOCvTerm(String name, String goId)`	createGOCvTerm
`static CvTerm`	`createGreaterThanRangeStatus()`	createGreaterThanRangeStatus
`static CvTerm`	`createIdentityQualifier()`	createIdentityQualifier
`static CvTerm`	`createIdentityQualifier(CvTerm psiMi)`	createIdentityQualifier
`static CvTerm`	`createIdentityQualifierNameOnly()`	createIdentityQualifierNameOnly
`static CvTerm`	`createIdentityXrefQualifier()`	createIdentityXrefQualifier
`static CvTerm`	`createImexDatabase()`	createImexDatabase
`static CvTerm`	`createImexPrimaryQualifier()`	createImexPrimaryQualifier
`static CvTerm`	`createInterproDatabase()`	createInterproDatabase
`static CvTerm`	`createIsoformSynonym()`	createIsoformSynonym
`static CvTerm`	`createLessThanRangeStatus()`	createLessThanRangeStatus
`static CvTerm`	`createLocusName()`	createLocusName
`static CvTerm`	`createMICvTerm(String name, String MI)`	createMICvTerm
`static CvTerm`	`createMODCvTerm(String name, String MOD)`	createMODCvTerm
`static CvTerm`	`createMoleculeSetType()`	createMoleculeSetType
`static CvTerm`	`createNTerminalRangeStatus()`	createNTerminalRangeStatus
`static CvTerm`	`createNTerminalStatus()`	createNTerminalStatus
`static CvTerm`	`createNucleicAcidInteractorType()`	createNucleicAcidInteractorType
`static CvTerm`	`createOrfName()`	createOrfName
`static CvTerm`	`createPARCvTerm(String name, String PAR)`	createPARCvTerm
`static CvTerm`	`createPolymerInteractorType()`	createPolymerInteractorType
`static CvTerm`	`createProteinInteractorType()`	createProteinInteractorType
`static CvTerm`	`createPsiMiDatabase()`	createPsiMiDatabase
`static CvTerm`	`createPsiMiDatabase(CvTerm identity)`	createPsiMiDatabase
`static CvTerm`	`createPsiMiDatabaseNameOnly()`	createPsiMiDatabaseNameOnly
`static CvTerm`	`createPsiModDatabase()`	createPsiModDatabase
`static CvTerm`	`createPsiParDatabase()`	createPsiParDatabase
`static CvTerm`	`createPubmedDatabase()`	createPubmedDatabase
`static CvTerm`	`createPutativeSelf()`	createPutativeSelf
`static CvTerm`	`createRaggedNTerminalStatus()`	createRaggedNTerminalStatus
`static CvTerm`	`createRangeStatus()`	createRangeStatus
`static CvTerm`	`createRefseqDatabase()`	createRefseqDatabase
`static CvTerm`	`createRigid()`	createRigid
`static CvTerm`	`createRogid()`	createRogid
`static CvTerm`	`createSecondaryXrefQualifier()`	createSecondaryXrefQualifier
`static CvTerm`	`createSelf()`	createSelf
`static CvTerm`	`createSmile()`	createSmile
`static CvTerm`	`createStandardInchi()`	createStandardInchi
`static CvTerm`	`createStandardInchiKey()`	createStandardInchiKey
`static CvTerm`	`createUndeterminedStatus()`	createUndeterminedStatus
`static CvTerm`	`createUniprotkbDatabase()`	createUniprotkbDatabase
`static CvTerm`	`createUnknownInteractorType()`	createUnknownInteractorType
`static CvTerm`	`createUnspecifiedMethod()`	createUnspecifiedMethod
`static CvTerm`	`createUnspecifiedRole()`	createUnspecifiedRole
`static CvTerm`	`getAllosteryMechanism()`	Getter for the field `allosteryMechanism`.
`static String`	`getBestIdentifier(CvTerm cvObject)`	Gets the unique identifier of a CvObject.
`static CvTerm`	`getCertain()`	Getter for the field `certain`.
`static CvTerm`	`getCTerminal()`	Getter for the field `cTerminal`.
`static CvTerm`	`getCTerminalRange()`	Getter for the field `cTerminalRange`.
`static CvTerm`	`getFuzzyRange()`	getFuzzyRange
`static CvTerm`	`getGene()`	Getter for the field `gene`.
`static CvTerm`	`getGreaterThan()`	Getter for the field `greaterThan`.
`static CvTerm`	`getIdentity()`	Getter for the field `identity`.
`static CvTerm`	`getImexPrimary()`	Getter for the field `imexPrimary`.
`static CvTerm`	`getLessThan()`	Getter for the field `lessThan`.
`static CvTerm`	`getNTerminal()`	Getter for the field `nTerminal`.
`static CvTerm`	`getNTerminalRagged()`	Getter for the field `nTerminalRagged`.
`static CvTerm`	`getNTerminalRange()`	Getter for the field `nTerminalRange`.
`static CvTerm`	`getPsimi()`	Getter for the field `psimi`.
`static Xref`	`getPsiMiReference(CvTerm term)`	getPsiMiReference
`static CvTerm`	`getPsimod()`	Getter for the field `psimod`.
`static Xref`	`getPsiModReference(CvTerm term)`	getPsiModReference
`static CvTerm`	`getPsipar()`	Getter for the field `psipar`.
`static Xref`	`getPsiParReference(CvTerm term)`	getPsiParReference
`static CvTerm`	`getPutativeSelf()`	getPutativeSelf
`static CvTerm`	`getSecondary()`	Getter for the field `secondary`.
`static CvTerm`	`getSelf()`	Getter for the field `self`.
`static CvTerm`	`getUndetermined()`	Getter for the field `undetermined`.
`static CvTerm`	`getUnknownInteractorType()`	Getter for the field `unknownInteractorType`.
`static boolean`	`isCvTerm(CvTerm term, String mi, String name)`	Check if the CvTerm natches the MI term and/or the name if no MI term exist

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - CvTermUtils
```
public CvTermUtils()
```
- Method Detail
  - getBestIdentifier
```
public static String getBestIdentifier(CvTerm cvObject)
```
    Gets the unique identifier of a CvObject. If it has PSI MI Identifier (miIdentifier) return it, otherwise returns the MOD identifier, If no MOD identifier, returns the PAR identifier. if no PAR identifier, returns the first identifier in the list of identifiers.
    
    Parameters:
    
    cvObject - The object to get the identifier from.
    
    Returns:
    
    The identifier. Will be null if no miIdentifier or identity xref is found.
    
    Since:
    
    1.8.0
  - getGene
```
public static CvTerm getGene()
```
    Getter for the field gene.
    
    Returns:
    
    a CvTerm object.
  - getAllosteryMechanism
```
public static CvTerm getAllosteryMechanism()
```
    Getter for the field allosteryMechanism.
    
    Returns:
    
    a CvTerm object.
  - getPsimi
```
public static CvTerm getPsimi()
```
    Getter for the field psimi.
    
    Returns:
    
    a CvTerm object.
  - getPsimod
```
public static CvTerm getPsimod()
```
    Getter for the field psimod.
    
    Returns:
    
    a CvTerm object.
  - getPsipar
```
public static CvTerm getPsipar()
```
    Getter for the field psipar.
    
    Returns:
    
    a CvTerm object.
  - getIdentity
```
public static CvTerm getIdentity()
```
    Getter for the field identity.
    
    Returns:
    
    a CvTerm object.
  - getSecondary
```
public static CvTerm getSecondary()
```
    Getter for the field secondary.
    
    Returns:
    
    a CvTerm object.
  - getImexPrimary
```
public static CvTerm getImexPrimary()
```
    Getter for the field imexPrimary.
    
    Returns:
    
    a CvTerm object.
  - getUndetermined
```
public static CvTerm getUndetermined()
```
    Getter for the field undetermined.
    
    Returns:
    
    a CvTerm object.
  - getNTerminalRange
```
public static CvTerm getNTerminalRange()
```
    Getter for the field nTerminalRange.
    
    Returns:
    
    a CvTerm object.
  - getCTerminalRange
```
public static CvTerm getCTerminalRange()
```
    Getter for the field cTerminalRange.
    
    Returns:
    
    a CvTerm object.
  - getFuzzyRange
```
public static CvTerm getFuzzyRange()
```
    getFuzzyRange
    
    Returns:
    
    a CvTerm object.
  - getNTerminal
```
public static CvTerm getNTerminal()
```
    Getter for the field nTerminal.
    
    Returns:
    
    a CvTerm object.
  - getCTerminal
```
public static CvTerm getCTerminal()
```
    Getter for the field cTerminal.
    
    Returns:
    
    a CvTerm object.
  - getNTerminalRagged
```
public static CvTerm getNTerminalRagged()
```
    Getter for the field nTerminalRagged.
    
    Returns:
    
    a CvTerm object.
  - getGreaterThan
```
public static CvTerm getGreaterThan()
```
    Getter for the field greaterThan.
    
    Returns:
    
    a CvTerm object.
  - getLessThan
```
public static CvTerm getLessThan()
```
    Getter for the field lessThan.
    
    Returns:
    
    a CvTerm object.
  - getCertain
```
public static CvTerm getCertain()
```
    Getter for the field certain.
    
    Returns:
    
    a CvTerm object.
  - getPutativeSelf
```
public static CvTerm getPutativeSelf()
```
    getPutativeSelf
    
    Returns:
    
    a CvTerm object.
  - getSelf
```
public static CvTerm getSelf()
```
    Getter for the field self.
    
    Returns:
    
    a CvTerm object.
  - getUnknownInteractorType
```
public static CvTerm getUnknownInteractorType()
```
    Getter for the field unknownInteractorType.
    
    Returns:
    
    a CvTerm object.
  - createPsiMiDatabaseNameOnly
```
public static CvTerm createPsiMiDatabaseNameOnly()
```
    createPsiMiDatabaseNameOnly
    
    Returns:
    
    a CvTerm object.
  - createIdentityQualifierNameOnly
```
public static CvTerm createIdentityQualifierNameOnly()
```
    createIdentityQualifierNameOnly
    
    Returns:
    
    a CvTerm object.
  - createMICvTerm
```
public static CvTerm createMICvTerm(String name,
                                    String MI)
```
    createMICvTerm
    
    Parameters:
    
    name - a String object.
    
    MI - a String object.
    
    Returns:
    
    a CvTerm object.
  - createECOCvTerm
```
public static CvTerm createECOCvTerm(String name,
                                     String ecoId)
```
    createECOCvTerm
    
    Parameters:
    
    name - a String object.
    
    ecoId - a String object.
    
    Returns:
    
    a CvTerm object.
  - createGOCvTerm
```
public static CvTerm createGOCvTerm(String name,
                                    String goId)
```
    createGOCvTerm
    
    Parameters:
    
    name - a String object.
    
    goId - a String object.
    
    Returns:
    
    a CvTerm object.
  - createMODCvTerm
```
public static CvTerm createMODCvTerm(String name,
                                     String MOD)
```
    createMODCvTerm
    
    Parameters:
    
    name - a String object.
    
    MOD - a String object.
    
    Returns:
    
    a CvTerm object.
  - createPARCvTerm
```
public static CvTerm createPARCvTerm(String name,
                                     String PAR)
```
    createPARCvTerm
    
    Parameters:
    
    name - a String object.
    
    PAR - a String object.
    
    Returns:
    
    a CvTerm object.
  - createPsiMiDatabase
```
public static CvTerm createPsiMiDatabase()
```
    createPsiMiDatabase
    
    Returns:
    
    a CvTerm object.
  - createPsiModDatabase
```
public static CvTerm createPsiModDatabase()
```
    createPsiModDatabase
    
    Returns:
    
    a CvTerm object.
  - createPsiParDatabase
```
public static CvTerm createPsiParDatabase()
```
    createPsiParDatabase
    
    Returns:
    
    a CvTerm object.
  - createIdentityQualifier
```
public static CvTerm createIdentityQualifier()
```
    createIdentityQualifier
    
    Returns:
    
    a CvTerm object.
  - createChebiDatabase
```
public static CvTerm createChebiDatabase()
```
    createChebiDatabase
    
    Returns:
    
    a CvTerm object.
  - createEnsemblDatabase
```
public static CvTerm createEnsemblDatabase()
```
    createEnsemblDatabase
    
    Returns:
    
    a CvTerm object.
  - createEnsemblGenomesDatabase
```
public static CvTerm createEnsemblGenomesDatabase()
```
    createEnsemblGenomesDatabase
    
    Returns:
    
    a CvTerm object.
  - createEntrezGeneIdDatabase
```
public static CvTerm createEntrezGeneIdDatabase()
```
    createEntrezGeneIdDatabase
    
    Returns:
    
    a CvTerm object.
  - createRefseqDatabase
```
public static CvTerm createRefseqDatabase()
```
    createRefseqDatabase
    
    Returns:
    
    a CvTerm object.
  - createDdbjEmblGenbankDatabase
```
public static CvTerm createDdbjEmblGenbankDatabase()
```
    createDdbjEmblGenbankDatabase
    
    Returns:
    
    a CvTerm object.
  - createUniprotkbDatabase
```
public static CvTerm createUniprotkbDatabase()
```
    createUniprotkbDatabase
    
    Returns:
    
    a CvTerm object.
  - createImexDatabase
```
public static CvTerm createImexDatabase()
```
    createImexDatabase
    
    Returns:
    
    a CvTerm object.
  - createComplexPortalDatabase
```
public static CvTerm createComplexPortalDatabase()
```
    createComplexPortalDatabase
    
    Returns:
    
    a CvTerm object.
  - createPubmedDatabase
```
public static CvTerm createPubmedDatabase()
```
    createPubmedDatabase
    
    Returns:
    
    a CvTerm object.
  - createDoiDatabase
```
public static CvTerm createDoiDatabase()
```
    createDoiDatabase
    
    Returns:
    
    a CvTerm object.
  - createInterproDatabase
```
public static CvTerm createInterproDatabase()
```
    createInterproDatabase
    
    Returns:
    
    a CvTerm object.
  - createSmile
```
public static CvTerm createSmile()
```
    createSmile
    
    Returns:
    
    a CvTerm object.
  - createStandardInchi
```
public static CvTerm createStandardInchi()
```
    createStandardInchi
    
    Returns:
    
    a CvTerm object.
  - createStandardInchiKey
```
public static CvTerm createStandardInchiKey()
```
    createStandardInchiKey
    
    Returns:
    
    a CvTerm object.
  - createRogid
```
public static CvTerm createRogid()
```
    createRogid
    
    Returns:
    
    a CvTerm object.
  - createRigid
```
public static CvTerm createRigid()
```
    createRigid
    
    Returns:
    
    a CvTerm object.
  - createCertainStatus
```
public static CvTerm createCertainStatus()
```
    createCertainStatus
    
    Returns:
    
    a CvTerm object.
  - createPutativeSelf
```
public static CvTerm createPutativeSelf()
```
    createPutativeSelf
    
    Returns:
    
    a CvTerm object.
  - createSelf
```
public static CvTerm createSelf()
```
    createSelf
    
    Returns:
    
    a CvTerm object.
  - createRangeStatus
```
public static CvTerm createRangeStatus()
```
    createRangeStatus
    
    Returns:
    
    a CvTerm object.
  - createUndeterminedStatus
```
public static CvTerm createUndeterminedStatus()
```
    createUndeterminedStatus
    
    Returns:
    
    a CvTerm object.
  - createNTerminalRangeStatus
```
public static CvTerm createNTerminalRangeStatus()
```
    createNTerminalRangeStatus
    
    Returns:
    
    a CvTerm object.
  - createCTerminalRangeStatus
```
public static CvTerm createCTerminalRangeStatus()
```
    createCTerminalRangeStatus
    
    Returns:
    
    a CvTerm object.
  - createNTerminalStatus
```
public static CvTerm createNTerminalStatus()
```
    createNTerminalStatus
    
    Returns:
    
    a CvTerm object.
  - createCTerminalStatus
```
public static CvTerm createCTerminalStatus()
```
    createCTerminalStatus
    
    Returns:
    
    a CvTerm object.
  - createRaggedNTerminalStatus
```
public static CvTerm createRaggedNTerminalStatus()
```
    createRaggedNTerminalStatus
    
    Returns:
    
    a CvTerm object.
  - createGreaterThanRangeStatus
```
public static CvTerm createGreaterThanRangeStatus()
```
    createGreaterThanRangeStatus
    
    Returns:
    
    a CvTerm object.
  - createLessThanRangeStatus
```
public static CvTerm createLessThanRangeStatus()
```
    createLessThanRangeStatus
    
    Returns:
    
    a CvTerm object.
  - createGeneInteractorType
```
public static CvTerm createGeneInteractorType()
```
    createGeneInteractorType
    
    Returns:
    
    a CvTerm object.
  - createPolymerInteractorType
```
public static CvTerm createPolymerInteractorType()
```
    createPolymerInteractorType
    
    Returns:
    
    a CvTerm object.
  - createProteinInteractorType
```
public static CvTerm createProteinInteractorType()
```
    createProteinInteractorType
    
    Returns:
    
    a CvTerm object.
  - createNucleicAcidInteractorType
```
public static CvTerm createNucleicAcidInteractorType()
```
    createNucleicAcidInteractorType
    
    Returns:
    
    a CvTerm object.
  - createBioactiveEntityType
```
public static CvTerm createBioactiveEntityType()
```
    createBioactiveEntityType
    
    Returns:
    
    a CvTerm object.
  - createMoleculeSetType
```
public static CvTerm createMoleculeSetType()
```
    createMoleculeSetType
    
    Returns:
    
    a CvTerm object.
  - createGeneNameAliasType
```
public static CvTerm createGeneNameAliasType()
```
    createGeneNameAliasType
    
    Returns:
    
    a CvTerm object.
  - createComplexInteractorType
```
public static CvTerm createComplexInteractorType()
```
    createComplexInteractorType
    
    Returns:
    
    a CvTerm object.
  - createComplexSynonym
```
public static CvTerm createComplexSynonym()
```
    createComplexSynonym
    
    Returns:
    
    a CvTerm object.
  - createAuthorAssignedName
```
public static CvTerm createAuthorAssignedName()
```
    createAuthorAssignedName
    
    Returns:
    
    a CvTerm object.
  - createGeneNameSynonym
```
public static CvTerm createGeneNameSynonym()
```
    createGeneNameSynonym
    
    Returns:
    
    a CvTerm object.
  - createIsoformSynonym
```
public static CvTerm createIsoformSynonym()
```
    createIsoformSynonym
    
    Returns:
    
    a CvTerm object.
  - createOrfName
```
public static CvTerm createOrfName()
```
    createOrfName
    
    Returns:
    
    a CvTerm object.
  - createLocusName
```
public static CvTerm createLocusName()
```
    createLocusName
    
    Returns:
    
    a CvTerm object.
  - createComplexRecommendedName
```
public static CvTerm createComplexRecommendedName()
```
    createComplexRecommendedName
    
    Returns:
    
    a CvTerm object.
  - createComplexSystematicName
```
public static CvTerm createComplexSystematicName()
```
    createComplexSystematicName
    
    Returns:
    
    a CvTerm object.
  - createUnspecifiedRole
```
public static CvTerm createUnspecifiedRole()
```
    createUnspecifiedRole
    
    Returns:
    
    a CvTerm object.
  - createComplexPhysicalProperties
```
public static CvTerm createComplexPhysicalProperties()
```
    createComplexPhysicalProperties
    
    Returns:
    
    a CvTerm object.
  - createImexPrimaryQualifier
```
public static CvTerm createImexPrimaryQualifier()
```
    createImexPrimaryQualifier
    
    Returns:
    
    a CvTerm object.
  - createComplexPortalPrimaryQualifier
```
public static CvTerm createComplexPortalPrimaryQualifier()
```
    createComplexPortalPrimaryQualifier
    
    Returns:
    
    a CvTerm object.
  - createAllosteryCooperativeMechanism
```
public static CvTerm createAllosteryCooperativeMechanism()
```
    createAllosteryCooperativeMechanism
    
    Returns:
    
    a CvTerm object.
  - createIdentityXrefQualifier
```
public static CvTerm createIdentityXrefQualifier()
```
    createIdentityXrefQualifier
    
    Returns:
    
    a CvTerm object.
  - createSecondaryXrefQualifier
```
public static CvTerm createSecondaryXrefQualifier()
```
    createSecondaryXrefQualifier
    
    Returns:
    
    a CvTerm object.
  - createBiologicalFeatureType
```
public static CvTerm createBiologicalFeatureType()
```
    createBiologicalFeatureType
    
    Returns:
    
    a CvTerm object.
  - createUnspecifiedMethod
```
public static CvTerm createUnspecifiedMethod()
```
    createUnspecifiedMethod
    
    Returns:
    
    a CvTerm object.
  - createUnknownInteractorType
```
public static CvTerm createUnknownInteractorType()
```
    createUnknownInteractorType
    
    Returns:
    
    a CvTerm object.
  - isCvTerm
```
public static boolean isCvTerm(CvTerm term,
                               String mi,
                               String name)
```
    Check if the CvTerm natches the MI term and/or the name if no MI term exist
    
    Parameters:
    
    term - : the term to check
    
    mi - : the mi id to compare
    
    name - : the name to compare
    
    Returns:
    
    true if the CvTerm natches the MI term and/or the name
  - getPsiMiReference
```
public static Xref getPsiMiReference(CvTerm term)
```
    getPsiMiReference
    
    Parameters:
    
    term - a CvTerm object.
    
    Returns:
    
    a Xref object.
  - getPsiModReference
```
public static Xref getPsiModReference(CvTerm term)
```
    getPsiModReference
    
    Parameters:
    
    term - a CvTerm object.
    
    Returns:
    
    a Xref object.
  - getPsiParReference
```
public static Xref getPsiParReference(CvTerm term)
```
    getPsiParReference
    
    Parameters:
    
    term - a CvTerm object.
    
    Returns:
    
    a Xref object.
  - createPsiMiDatabase
```
public static CvTerm createPsiMiDatabase(CvTerm identity)
```
    createPsiMiDatabase
    
    Parameters:
    
    identity - a CvTerm object.
    
    Returns:
    
    a CvTerm object.
  - createIdentityQualifier
```
public static CvTerm createIdentityQualifier(CvTerm psiMi)
```
    createIdentityQualifier
    
    Parameters:
    
    psiMi - a CvTerm object.
    
    Returns:
    
    a CvTerm object.

Class CvTermUtils

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

CvTermUtils

Method Detail

getBestIdentifier

getGene

getAllosteryMechanism

getPsimi

getPsimod

getPsipar

getIdentity

getSecondary

getImexPrimary

getUndetermined

getNTerminalRange

getCTerminalRange

getFuzzyRange

getNTerminal

getCTerminal

getNTerminalRagged

getGreaterThan

getLessThan

getCertain

getPutativeSelf

getSelf

getUnknownInteractorType

createPsiMiDatabaseNameOnly

createIdentityQualifierNameOnly

createMICvTerm

createECOCvTerm

createGOCvTerm

createMODCvTerm

createPARCvTerm

createPsiMiDatabase

createPsiModDatabase

createPsiParDatabase

createIdentityQualifier

createChebiDatabase

createEnsemblDatabase

createEnsemblGenomesDatabase

createEntrezGeneIdDatabase

createRefseqDatabase

createDdbjEmblGenbankDatabase

createUniprotkbDatabase

createImexDatabase

createComplexPortalDatabase

createPubmedDatabase

createDoiDatabase

createInterproDatabase

createSmile

createStandardInchi

createStandardInchiKey

createRogid

createRigid

createCertainStatus

createPutativeSelf

createSelf

createRangeStatus

createUndeterminedStatus

createNTerminalRangeStatus

createCTerminalRangeStatus

createNTerminalStatus

createCTerminalStatus

createRaggedNTerminalStatus

createGreaterThanRangeStatus

createLessThanRangeStatus

createGeneInteractorType

createPolymerInteractorType

createProteinInteractorType

createNucleicAcidInteractorType

createBioactiveEntityType

createMoleculeSetType

createGeneNameAliasType

createComplexInteractorType

createComplexSynonym

createAuthorAssignedName

createGeneNameSynonym