Package psidev.psi.mi.jami.utils.comparator

Class ComparatorUtils

java.lang.Object

psidev.psi.mi.jami.utils.comparator.ComparatorUtils

public class ComparatorUtils
extends Object

Utility class for Comparator

Since:

01/02/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
ComparatorUtils()

Method Summary

Modifier and Type	Method	Description
static boolean	areCvTermsEqual(Collection<? extends CvTerm> method1, Collection<? extends CvTerm> method2)	areCvTermsEqual
static boolean	areParametersEqual(Collection<? extends Parameter> method1, Collection<? extends Parameter> method2)	areParametersEqual
static boolean	areRangesEqual(Collection<? extends Range> method1, Collection<? extends Range> method2)	areRangesEqual
static int	compareIdentifiersWithDefaultIdentifier(String identifier1, String identifier2, String firstIdentifier)	If identifier1 and identifier2 are equals, it returns 0.
static boolean	findAtLeastOneMatchingAlias(Collection<? extends Alias> aliases1, Collection<? extends Alias> aliases2)	findAtLeastOneMatchingAlias
static boolean	findAtLeastOneMatchingIdentifier(Collection<? extends Xref> identifiers1, Collection<? extends Xref> identifiers2)	True if there is at least one identifier in identifiers1 that is identical to at least one identifier in identfiers2 ( equality based on DefaultExternalIdentifierComparator.areEquals)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ComparatorUtils

public ComparatorUtils()

Method Detail

compareIdentifiersWithDefaultIdentifier

public static int compareIdentifiersWithDefaultIdentifier(String identifier1,
                                                          String identifier2,
                                                          String firstIdentifier)

If identifier1 and identifier2 are equals, it returns 0. If identifier1 and identifier2 are not equals: - the external identifier that is equal to firstIdentifier will always come first - if both external identifiers are different from the the first identifier, it will return the results of identifier1.compareTo(identifier2)

Parameters:

identifier1 - : first identifier to compare

identifier2 - : second identifier to compare

firstIdentifier - : the default identifier that we want to have first

Returns:

a int.

findAtLeastOneMatchingIdentifier

public static boolean findAtLeastOneMatchingIdentifier(Collection<? extends Xref> identifiers1,
                                                       Collection<? extends Xref> identifiers2)

True if there is at least one identifier in identifiers1 that is identical to at least one identifier in identfiers2 ( equality based on DefaultExternalIdentifierComparator.areEquals)

Parameters:

identifiers1 - a Collection object.

identifiers2 - a Collection object.

Returns:

a boolean.

findAtLeastOneMatchingAlias

public static boolean findAtLeastOneMatchingAlias(Collection<? extends Alias> aliases1,
                                                  Collection<? extends Alias> aliases2)

findAtLeastOneMatchingAlias

Parameters:

aliases1 - a Collection object.

aliases2 - a Collection object.

Returns:

a boolean.

areCvTermsEqual

public static boolean areCvTermsEqual(Collection<? extends CvTerm> method1,
                                      Collection<? extends CvTerm> method2)

areCvTermsEqual

Parameters:

method1 - a Collection object.

method2 - a Collection object.

Returns:

a boolean.

areParametersEqual

public static boolean areParametersEqual(Collection<? extends Parameter> method1,
                                         Collection<? extends Parameter> method2)

areParametersEqual

Parameters:

method1 - a Collection object.

method2 - a Collection object.

Returns:

a boolean.

areRangesEqual

public static boolean areRangesEqual(Collection<? extends Range> method1,
                                     Collection<? extends Range> method2)

areRangesEqual

Parameters:

method1 - a Collection object.

method2 - a Collection object.

Returns:

a boolean.