Package psidev.psi.mi.jami.utils.comparator.cooperativity

Class DefaultExactAllosteryComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.cooperativity.DefaultExactAllosteryComparator

public class DefaultExactAllosteryComparator
extends Object

Default exact comparator for Allostery It will first compare basic cooperative effect properties using DefaultExactCooperativeEffectBaseComparator. Then, it will compare the allosteric effector types : - molecule effector types always come first - if both allosteric effector are molecule effectors, it will use DefaultExactMoleculeEffectorComparator to compare them - if both allosteric effector are feature modification effectors, it will use DefaultFeatureModificationEffectorComparator to compare them Then, it will compare the allosteric mechanisms using DefaultCvTermComparator Then, it will compare the allostery type using DefaultCvTermComparator Finally, it will compare the allosteric molecule using DefaultExactModelledParticipantComparator

Since:

31/05/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
DefaultExactAllosteryComparator()

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(Allostery allostery1, Allostery allostery2)	Use DefaultExactAllosteryComparator to know if two allostery are equals.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DefaultExactAllosteryComparator

public DefaultExactAllosteryComparator()

Method Detail

areEquals

public static boolean areEquals(Allostery allostery1,
                                Allostery allostery2)

Use DefaultExactAllosteryComparator to know if two allostery are equals.

Parameters:

allostery1 - a Allostery object.

allostery2 - a Allostery object.

Returns:

true if the two Allostery are equal