Package psidev.psi.mi.jami.utils.comparator.interaction

Class UnambiguousInteractionBaseComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.interaction.InteractionBaseComparator

psidev.psi.mi.jami.utils.comparator.interaction.UnambiguousInteractionBaseComparator

All Implemented Interfaces:

Comparator<Interaction>

public class UnambiguousInteractionBaseComparator
extends InteractionBaseComparator

Unambiguous Interaction comparator. It will first compare the interaction types using UnambiguousCvTermComparator. Then it will compare the rigids (case sensitive, null rigids always come after). Then it will compare the identifiers using UnambiguousExternalIdentifierComparator. If the interactions do not have any identifiers, it will compare the shortnames (case sensitive, shortname null comes always after)

Since:

18/01/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousInteractionBaseComparator()	Creates a new UnambiguousInteractionBaseComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(Interaction interaction1, Interaction interaction2)	Use UnambiguousInteractionBaseComparator to know if two interactions are equals.
UnambiguousCvTermComparator	getCvTermComparator()	getCvTermComparator
UnambiguousExternalIdentifierComparator	getIdentifierComparator()	getIdentifierComparator
static int	hashCode(Interaction interaction)	hashCode

Methods inherited from class psidev.psi.mi.jami.utils.comparator.interaction.InteractionBaseComparator

compare, getIdentifierCollectionComparator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousInteractionBaseComparator

public UnambiguousInteractionBaseComparator()

Creates a new UnambiguousInteractionBaseComparator. It will use a UnambiguousParticipantBaseComparator to compare participants and UnambiguousCvTermcomparator to compare interaction types

Method Detail

getCvTermComparator

public UnambiguousCvTermComparator getCvTermComparator()

getCvTermComparator

Overrides:

getCvTermComparator in class InteractionBaseComparator

Returns:

a UnambiguousCvTermComparator object.

getIdentifierComparator

public UnambiguousExternalIdentifierComparator getIdentifierComparator()

getIdentifierComparator

Overrides:

getIdentifierComparator in class InteractionBaseComparator

Returns:

a UnambiguousExternalIdentifierComparator object.

areEquals

public static boolean areEquals(Interaction interaction1,
                                Interaction interaction2)

Use UnambiguousInteractionBaseComparator to know if two interactions are equals.

Parameters:

interaction1 - a Interaction object.

interaction2 - a Interaction object.

Returns:

true if the two interactions are equal

hashCode

public static int hashCode(Interaction interaction)

hashCode

Parameters:

interaction - a Interaction object.

Returns:

the hashcode consistent with the equals method for this comparator