Package psidev.psi.mi.jami.utils.comparator.range

Class RangeAndResultingSequenceComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.range.RangeComparator

psidev.psi.mi.jami.utils.comparator.range.RangeAndResultingSequenceComparator

All Implemented Interfaces:

Comparator<Range>

Direct Known Subclasses:

UnambiguousRangeAndResultingSequenceComparator

public class RangeAndResultingSequenceComparator
extends RangeComparator

Simple range comparator that will also compare resulting sequences.. It compares first the start Position, then the end Position using a PositionComparator, If start/end positions are equals, the linked ranges will always come before the ranges that are not linked. - Two ranges which are null are equals - The range which is not null is before null. Then, if the positions and linked boolean are the same, it will compare the resultingSequences using ResultingSequenceComparator

Since:

21/05/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
RangeAndResultingSequenceComparator(PositionComparator positionComparator)	Creates a new RangeComparator

Method Summary

Modifier and Type	Method	Description
int	compare(Range range1, Range range2)	It compares first the start Position, then the end Position using a PositionComparator, If start/end positions are equals, the linked ranges will always come before the ranges that are not linked.
ResultingSequenceComparator	getResultingSequenceComparator()	Getter for the field resultingSequenceComparator.

Methods inherited from class psidev.psi.mi.jami.utils.comparator.range.RangeComparator

getPositionComparator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

RangeAndResultingSequenceComparator

public RangeAndResultingSequenceComparator(PositionComparator positionComparator)

Creates a new RangeComparator

Parameters:

positionComparator - : the position comparator is required to compare start/end positions

Method Detail

getResultingSequenceComparator

public ResultingSequenceComparator getResultingSequenceComparator()

Getter for the field resultingSequenceComparator.

Returns:

a ResultingSequenceComparator object.

compare

public int compare(Range range1,
                   Range range2)

It compares first the start Position, then the end Position using a PositionComparator, If start/end positions are equals, the linked ranges will always come before the ranges that are not linked. - Two ranges which are null are equals - The range which is not null is before null. It compares first the start Position, then the end Position using a PositionComparator, If start/end positions are equals, the linked ranges will always come before the ranges that are not linked. If both ranges have the same positions and linked property, it will compare the resultingSequences using ResultingSequenceComparator - Two ranges which are null are equals - The range which is not null is before null.

Specified by:

compare in interface Comparator<Range>

Overrides:

compare in class RangeComparator

Parameters:

range1 - a Range object.

range2 - a Range object.

Returns:

a int.