Package psidev.psi.mi.jami.xml.io.writer.elements.impl

Class AbstractXmlSourceWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.elements.impl.AbstractXmlSourceWriter

All Implemented Interfaces:

PsiXmlElementWriter<Source>, PsiXmlSourceWriter

Direct Known Subclasses:

XmlSourceWriter, XmlSourceWriter

public abstract class AbstractXmlSourceWriter
extends Object
implements PsiXmlSourceWriter

Abstract class for writer of a source in an entry.

Since:

11/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
AbstractXmlSourceWriter(XMLStreamWriter writer)	Constructor for AbstractXmlSourceWriter.

Method Summary

Modifier and Type	Method	Description
PsiXmlElementWriter<Alias>	getAliasWriter()	Getter for the field aliasWriter.
PsiXmlElementWriter<Annotation>	getAttributeWriter()	Getter for the field attributeWriter.
XMLGregorianCalendar	getDefaultReleaseDate()	getDefaultReleaseDate.
PsiXmlElementWriter<Publication>	getPublicationWriter()	Getter for the field publicationWriter.
protected XMLStreamWriter	getStreamWriter()	Getter for the field streamWriter.
PsiXmlXrefWriter	getXrefWriter()	Getter for the field xrefWriter.
protected abstract void	initialisePublicationWriter()	initialisePublicationWriter.
protected void	initialiseXrefWriter()	initialiseXrefWriter.
void	setAliasWriter(PsiXmlElementWriter<Alias> aliasWriter)	Setter for the field aliasWriter.
void	setAttributeWriter(PsiXmlElementWriter<Annotation> attributeWriter)	Setter for the field attributeWriter.
void	setDefaultReleaseDate(XMLGregorianCalendar date)	Sets the default release date
void	setPublicationWriter(PsiXmlElementWriter<Publication> publicationWriter)	Setter for the field publicationWriter.
void	setXrefWriter(PsiXmlXrefWriter xrefWriter)	Setter for the field xrefWriter.
void	write(Source object)	write.
protected void	writeAttributes(Source object)	writeAttributes.
protected void	writeBibRef(Source object)	writeBibRef.
protected void	writeNames(Source object)	writeNames.
protected void	writeReleaseAttributes(Source object)	writeReleaseAttributes.
protected void	writeXref(Source object)	writeXref.
protected void	writeXrefFromSourceIdentifiers(Source object)	writeXrefFromSourceIdentifiers.
protected void	writeXrefFromSourceXrefs(Source object)	writeXrefFromSourceXrefs.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AbstractXmlSourceWriter

public AbstractXmlSourceWriter(XMLStreamWriter writer)

Constructor for AbstractXmlSourceWriter.

Parameters:

writer - a XMLStreamWriter object.

Method Detail

getAliasWriter

public PsiXmlElementWriter<Alias> getAliasWriter()

Getter for the field aliasWriter.

Returns:

a PsiXmlElementWriter object.

setAliasWriter

public void setAliasWriter(PsiXmlElementWriter<Alias> aliasWriter)

Setter for the field aliasWriter.

Parameters:

aliasWriter - a PsiXmlElementWriter object.

getXrefWriter

public PsiXmlXrefWriter getXrefWriter()

Getter for the field xrefWriter.

Returns:

a PsiXmlXrefWriter object.

initialiseXrefWriter

protected void initialiseXrefWriter()

initialiseXrefWriter.

setXrefWriter

public void setXrefWriter(PsiXmlXrefWriter xrefWriter)

Setter for the field xrefWriter.

Parameters:

xrefWriter - a PsiXmlXrefWriter object.

getPublicationWriter

public PsiXmlElementWriter<Publication> getPublicationWriter()

Getter for the field publicationWriter.

Returns:

a PsiXmlElementWriter object.

initialisePublicationWriter

protected abstract void initialisePublicationWriter()

initialisePublicationWriter.

setPublicationWriter

public void setPublicationWriter(PsiXmlElementWriter<Publication> publicationWriter)

Setter for the field publicationWriter.

Parameters:

publicationWriter - a PsiXmlElementWriter object.

getAttributeWriter

public PsiXmlElementWriter<Annotation> getAttributeWriter()

Getter for the field attributeWriter.

Returns:

a PsiXmlElementWriter object.

setAttributeWriter

public void setAttributeWriter(PsiXmlElementWriter<Annotation> attributeWriter)

Setter for the field attributeWriter.

Parameters:

attributeWriter - a PsiXmlElementWriter object.

write

public void write(Source object)
           throws MIIOException

write.

Specified by:

write in interface PsiXmlElementWriter<Source>

Parameters:

object - a T object.

Throws:

MIIOException - if any.

writeAttributes

protected void writeAttributes(Source object)
                        throws XMLStreamException

writeAttributes.

Parameters:

object - a Source object.

Throws:

XMLStreamException - if any.

writeXref

protected void writeXref(Source object)
                  throws XMLStreamException

writeXref.

Parameters:

object - a Source object.

Throws:

XMLStreamException - if any.

writeBibRef

protected void writeBibRef(Source object)

writeBibRef.

Parameters:

object - a Source object.

writeNames

protected void writeNames(Source object)
                   throws XMLStreamException

writeNames.

Parameters:

object - a Source object.

Throws:

XMLStreamException - if any.

writeReleaseAttributes

protected void writeReleaseAttributes(Source object)
                               throws XMLStreamException

writeReleaseAttributes.

Parameters:

object - a Source object.

Throws:

XMLStreamException - if any.

writeXrefFromSourceXrefs

protected void writeXrefFromSourceXrefs(Source object)
                                 throws XMLStreamException

writeXrefFromSourceXrefs.

Parameters:

object - a Source object.

Throws:

XMLStreamException - if any.

writeXrefFromSourceIdentifiers

protected void writeXrefFromSourceIdentifiers(Source object)
                                       throws XMLStreamException

writeXrefFromSourceIdentifiers.

Parameters:

object - a Source object.

Throws:

XMLStreamException - if any.

getStreamWriter

protected XMLStreamWriter getStreamWriter()

Getter for the field streamWriter.

Returns:

a XMLStreamWriter object.

getDefaultReleaseDate

public XMLGregorianCalendar getDefaultReleaseDate()

getDefaultReleaseDate.

Specified by:

getDefaultReleaseDate in interface PsiXmlSourceWriter

Returns:

the default release date. Can be null

setDefaultReleaseDate

public void setDefaultReleaseDate(XMLGregorianCalendar date)

Sets the default release date

Specified by:

setDefaultReleaseDate in interface PsiXmlSourceWriter

Parameters:

date - a XMLGregorianCalendar object.