Package psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30

Class XmlNamedExperimentWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlExperimentWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30.XmlExperimentWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30.XmlNamedExperimentWriter

All Implemented Interfaces:

PsiXmlElementWriter<Experiment>, PsiXmlExperimentWriter

Direct Known Subclasses:

XmlExperimentWriter

public class XmlNamedExperimentWriter
extends XmlExperimentWriter

XML 3.0 experiment writer for a named experiment having shortlabel, fullname and aliases

Since:

13/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
XmlNamedExperimentWriter(XMLStreamWriter writer, PsiXmlObjectCache objectIndex)	Constructor for XmlNamedExperimentWriter.

Method Summary

Modifier and Type	Method	Description
PsiXmlElementWriter<Alias>	getAliasWriter()	Getter for the field aliasWriter.
void	setAliasWriter(PsiXmlElementWriter<Alias> aliasWriter)	Setter for the field aliasWriter.
protected void	writeNames(Experiment object)	writeNames.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30.XmlExperimentWriter

getVariableParameterWriter, initialiseConfidenceWriter, initialiseDetectionMethodWriter, initialiseHostOrganismWriter, initialisePublicationWriter, initialiseVariableParameterWriter, initialiseXrefWriter, setVariableParameterWriter, writeExperimentXrefs, writeOtherAttributes, writeVariableParameters

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlExperimentWriter

extractDefaultParticipantIdentificationMethod, getAttributeWriter, getConfidenceWriter, getDefaultPublication, getDetectionMethodWriter, getHostOrganismWriter, getObjectIndex, getPublicationWriter, getStreamWriter, getVersion, getXrefWriter, initialiseDefaultPublication, setAttributeWriter, setConfidenceWriter, setDefaultPublication, setDetectionMethodWriter, setHostOrganismWriter, setPublicationWriter, setXrefWriter, write, writeAttributes, writeConfidences, writeExperiment, writeHostOrganism, writeInteractiondetectionMethod, writeOtherProperties, writeParticipantIdentificationMethod, writePublicationAndXrefs, writeXrefFromExperimentXrefs

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

XmlNamedExperimentWriter

public XmlNamedExperimentWriter(XMLStreamWriter writer,
                                PsiXmlObjectCache objectIndex)

Constructor for XmlNamedExperimentWriter.

Parameters:

writer - a XMLStreamWriter object.

objectIndex - a PsiXmlObjectCache object.

Method Detail

getAliasWriter

public PsiXmlElementWriter<Alias> getAliasWriter()

Getter for the field aliasWriter.

Returns:

a PsiXmlElementWriter object.

setAliasWriter

public void setAliasWriter(PsiXmlElementWriter<Alias> aliasWriter)

Setter for the field aliasWriter.

Parameters:

aliasWriter - a PsiXmlElementWriter object.

writeNames

protected void writeNames(Experiment object)
                   throws XMLStreamException

writeNames.

Overrides:

writeNames in class AbstractXmlExperimentWriter

Parameters:

object - a Experiment object.

Throws:

XMLStreamException - if any.