Package psidev.psi.mi.jami.xml.model.extension

Class AbstractInferredInteraction

java.lang.Object

psidev.psi.mi.jami.xml.model.extension.AbstractInferredInteraction

All Implemented Interfaces:

com.sun.xml.bind.Locatable, FileSourceContext

Direct Known Subclasses:

InferredInteraction, InferredInteraction, InferredInteraction

public abstract class AbstractInferredInteraction
extends Object
implements FileSourceContext, com.sun.xml.bind.Locatable

Java class for inferredInteraction complex type.

The following schema fragment specifies the expected content contained within this class.

 <complexType name="inferredInteraction">
   <complexContent>
     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
       <sequence>
         <elements name="participant" type="{http://psi.hupo.org/mi/mif}inferredInteractionParticipant" maxOccurs="unbounded" minOccurs="2"/>
         <elements name="experimentRefList" type="{http://psi.hupo.org/mi/mif}experimentRefList" minOccurs="0"/>
       </sequence>
     </restriction>
   </complexContent>
 </complexType>
 

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	AbstractInferredInteraction.AbstractJAXBExperimentRefWrapper

Constructor Summary

Constructors

Constructor	Description
AbstractInferredInteraction()	Constructor for AbstractInferredInteraction.

Method Summary

Modifier and Type	Method	Description
abstract Collection<Experiment>	getExperiments()	getExperiments.
AbstractInferredInteraction.AbstractJAXBExperimentRefWrapper	getJaxbExperimentRefWrapper()
List<AbstractInferredInteractionParticipant>	getParticipants()	Gets the value of the participants property.
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
void	setJAXBExperimentRefWrapper(AbstractInferredInteraction.AbstractJAXBExperimentRefWrapper wrapper)	Gets the value of the experimentRefList property.
void	setParticipants(List<AbstractInferredInteractionParticipant> participants)
void	setSourceLocator(FileSourceLocator sourceLocator)	Sets the source locator
Locator	sourceLocation()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.datasource.FileSourceContext

toString

Constructor Detail

AbstractInferredInteraction

public AbstractInferredInteraction()

Constructor for AbstractInferredInteraction.

Method Detail

getExperiments

public abstract Collection<Experiment> getExperiments()

getExperiments.

Returns:

a Collection object.

sourceLocation

public Locator sourceLocation()

Specified by:

sourceLocation in interface com.sun.xml.bind.Locatable

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Returns:

a FileSourceLocator object.

setSourceLocator

public void setSourceLocator(FileSourceLocator sourceLocator)

Sets the source locator

Specified by:

setSourceLocator in interface FileSourceContext

Parameters:

sourceLocator - : the file locator

getParticipants

public List<AbstractInferredInteractionParticipant> getParticipants()

Gets the value of the participants property.

This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the participants property.

For example, to add a new item, do as follows:

    getLinkedFeatures().add(newItem);
 

Objects of the following type(s) are allowed in the list AbstractInferredInteractionParticipant

Returns:

a List object.

setParticipants

public void setParticipants(List<AbstractInferredInteractionParticipant> participants)

getJaxbExperimentRefWrapper

public AbstractInferredInteraction.AbstractJAXBExperimentRefWrapper getJaxbExperimentRefWrapper()

setJAXBExperimentRefWrapper

public void setJAXBExperimentRefWrapper(AbstractInferredInteraction.AbstractJAXBExperimentRefWrapper wrapper)

Gets the value of the experimentRefList property.

Parameters:

wrapper - a AbstractInferredInteraction.AbstractJAXBExperimentRefWrapper object.