Package psidev.psi.mi.jami.crosslink.extension

Class CsvExperimentalParticipantCandidate

java.lang.Object

psidev.psi.mi.jami.model.impl.AbstractEntity<F>

psidev.psi.mi.jami.model.impl.AbstractParticipantCandidate<ExperimentalParticipantPool,FeatureEvidence>

psidev.psi.mi.jami.model.impl.DefaultExperimentalParticipantCandidate

psidev.psi.mi.jami.crosslink.extension.CsvExperimentalParticipantCandidate

All Implemented Interfaces:

FileSourceContext, Entity<FeatureEvidence>, ExperimentalEntity, ExperimentalParticipantCandidate, ParticipantCandidate<ExperimentalParticipantPool,FeatureEvidence>

public class CsvExperimentalParticipantCandidate
extends DefaultExperimentalParticipantCandidate
implements FileSourceContext

Crosslink CSV extension of ExperimentalParticipantCandidate. It contains a FileSourceLocator

Since:

11/06/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
CsvExperimentalParticipantCandidate(Interactor interactor)	Constructor for CsvExperimentalParticipantCandidate.
CsvExperimentalParticipantCandidate(Interactor interactor, Stoichiometry stoichiometry)	Constructor for CsvExperimentalParticipantCandidate.

Method Summary

Modifier and Type	Method	Description
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
void	setSourceLocator(FileSourceLocator sourceLocator)	Sets the source locator
String	toString()

Methods inherited from class psidev.psi.mi.jami.model.impl.AbstractParticipantCandidate

getParentPool, setParentPool

Methods inherited from class psidev.psi.mi.jami.model.impl.AbstractEntity

addAllFeatures, addFeature, getCausalRelationships, getChangeListener, getFeatures, getInteractor, getStoichiometry, initialiseCausalRelationships, initialiseCausalRelationshipsWith, initialiseFeatures, initialiseFeaturesWith, removeAllFeatures, removeFeature, setChangeListener, setInteractor, setStoichiometry, setStoichiometry

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.model.Entity

addAllFeatures, addFeature, getCausalRelationships, getChangeListener, getFeatures, getInteractor, getStoichiometry, removeAllFeatures, removeFeature, setChangeListener, setInteractor, setStoichiometry, setStoichiometry

Methods inherited from interface psidev.psi.mi.jami.model.ParticipantCandidate

getParentPool, setParentPool

Constructor Detail

CsvExperimentalParticipantCandidate

public CsvExperimentalParticipantCandidate(Interactor interactor)

Constructor for CsvExperimentalParticipantCandidate.

Parameters:

interactor - a Interactor object.

CsvExperimentalParticipantCandidate

public CsvExperimentalParticipantCandidate(Interactor interactor,
                                           Stoichiometry stoichiometry)

Constructor for CsvExperimentalParticipantCandidate.

Parameters:

interactor - a Interactor object.

stoichiometry - a Stoichiometry object.

Method Detail

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Returns:

a FileSourceLocator object.

setSourceLocator

public void setSourceLocator(FileSourceLocator sourceLocator)

Sets the source locator

Specified by:

setSourceLocator in interface FileSourceContext

Parameters:

sourceLocator - : the file locator

toString

public String toString()

Specified by:

toString in interface FileSourceContext

Overrides:

toString in class AbstractParticipantCandidate<ExperimentalParticipantPool,FeatureEvidence>

Returns:

the file source context as a String. If the source locator is not null, it should give the source locator properties