Package psidev.psi.mi.jami.enricher.impl.full

Class FullGeneUpdater

java.lang.Object

psidev.psi.mi.jami.enricher.impl.AbstractMIEnricher<T>

psidev.psi.mi.jami.enricher.impl.AbstractInteractorEnricher<T>

psidev.psi.mi.jami.enricher.impl.AbstractInteractorUpdater<Gene>

psidev.psi.mi.jami.enricher.impl.minimal.MinimalGeneUpdater

psidev.psi.mi.jami.enricher.impl.full.FullGeneUpdater

All Implemented Interfaces:

InteractorEnricher<Gene>, MIEnricher<Gene>

public class FullGeneUpdater
extends MinimalGeneUpdater

A full updater for genes. See description of full update in AbstractInteractorEnricher. The GeneFetcher is required for enriching genes.

Since:

04/09/13

Author:

Gabriel Aldam (galdam@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
FullGeneUpdater(GeneFetcher fetcher)	Constructor for FullGeneUpdater.

Method Summary

Modifier and Type	Method	Description
protected boolean	isFullEnrichment()	isFullEnrichment.

Methods inherited from class psidev.psi.mi.jami.enricher.impl.AbstractInteractorUpdater

canEnrichInteractor, find, getInteractorEnricher, getListener, onCompletedEnrichment, onEnrichedVersionNotFound, onInteractorCheckFailure, processAliases, processAnnotations, processChecksums, processFullName, processIdentifiers, processInteractorType, processOrganism, processShortLabel, processXrefs, setListener

Methods inherited from class psidev.psi.mi.jami.enricher.impl.AbstractInteractorEnricher

enrich, getCvTermEnricher, getInteractorFetcher, getOrganismEnricher, getRetryCount, processInteractorType, processOrganism, processOtherProperties, setCvTermEnricher, setOrganismEnricher, setRetryCount

Methods inherited from class psidev.psi.mi.jami.enricher.impl.AbstractMIEnricher

enrich, enrich

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.enricher.MIEnricher

enrich, enrich

Constructor Detail

FullGeneUpdater

public FullGeneUpdater(GeneFetcher fetcher)

Constructor for FullGeneUpdater.

Parameters:

fetcher - a GeneFetcher object.

Method Detail

isFullEnrichment

protected boolean isFullEnrichment()

isFullEnrichment.

Overrides:

isFullEnrichment in class AbstractInteractorUpdater<Gene>

Returns:

a boolean.