java.lang.Object
- psidev.psi.mi.jami.model.impl.DefaultInteractor
- - psidev.psi.mi.jami.model.impl.DefaultInteractorPool

All Implemented Interfaces:

Iterable<Interactor>, Collection<Interactor>, Interactor, InteractorPool

Direct Known Subclasses:

MitabInteractorPool
```
public class DefaultInteractorPool
extends DefaultInteractor
implements InteractorPool
```
Default implementation for interactor pool
Notes: The equals and hashcode methods have NOT been overridden because the InteractorPool object is a complex object. To compare InteractorPool objects, you can use some comparators provided by default: - DefaultInteractorPoolComparator - UnambiguousInteractorPoolComparator - DefaultExactInteractorPoolComparator - UnambiguousExactInteractorPoolComparator
Since:
```
04/02/13
```
Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Field Summary
- Fields inherited from interface psidev.psi.mi.jami.model.Interactor
  UNKNOWN_INTERACTOR, UNKNOWN_INTERACTOR_MI
- Fields inherited from interface psidev.psi.mi.jami.model.InteractorPool
  CANDIDATE_SET, CANDIDATE_SET_MI, DEFINED_SET, DEFINED_SET_MI, MOLECULE_SET, MOLECULE_SET_MI, OPEN_SET, OPEN_SET_MI

Constructor Summary

Constructors
Constructor	Description
`DefaultInteractorPool(String name)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, String fullName)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, String fullName, CvTerm type)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, String fullName, CvTerm type, Organism organism)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, String fullName, CvTerm type, Organism organism, Xref uniqueId)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, String fullName, CvTerm type, Xref uniqueId)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, String fullName, Organism organism)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, String fullName, Organism organism, Xref uniqueId)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, String fullName, Xref uniqueId)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, CvTerm type)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, CvTerm type, Organism organism)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, CvTerm type, Organism organism, Xref uniqueId)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, CvTerm type, Xref uniqueId)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, Organism organism)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, Organism organism, Xref uniqueId)`	Constructor for DefaultInteractorPool.
`DefaultInteractorPool(String name, Xref uniqueId)`	Constructor for DefaultInteractorPool.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`boolean`	`add(Interactor interactor)`	add
`boolean`	`addAll(Collection<? extends Interactor> interactors)`
`void`	`clear()`	clear
`boolean`	`contains(Object o)`
`boolean`	`containsAll(Collection<?> objects)`
`protected void`	`initialiseInteractorCandidatesSet()`	initialiseInteractorCandidatesSet
`protected void`	`initialiseInteractorCandidatesSetWith(Set<Interactor> interactorCandidates)`
`boolean`	`isEmpty()`	isEmpty
`Iterator<Interactor>`	`iterator()`	iterator
`boolean`	`remove(Object o)`
`boolean`	`removeAll(Collection<?> objects)`
`boolean`	`retainAll(Collection<?> objects)`
`void`	`setInteractorType(CvTerm type)`	Sets the molecule type for this interactor If the given type is null, this method automatically sets the interactor type to 'unknown participant' (MI:0329)
`int`	`size()`	size
`Object[]`	`toArray()`	toArray
`<T> T[]`	`toArray(T[] ts)`	toArray

Methods inherited from class psidev.psi.mi.jami.model.impl.DefaultInteractor
getAliases, getAnnotations, getChecksums, getFullName, getIdentifiers, getInteractorType, getOrganism, getPreferredIdentifier, getPreferredName, getShortName, getXrefs, initialiseAliases, initialiseAliasesWith, initialiseAnnotations, initialiseAnnotationsWith, initialiseChecksums, initialiseChecksumsWith, initialiseIdentifiers, initialiseIdentifiersWith, initialiseXrefs, initialiseXrefsWith, setFullName, setOrganism, setShortName, toString

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.Collection
equals, hashCode, parallelStream, removeIf, spliterator, stream, toArray

Methods inherited from interface psidev.psi.mi.jami.model.Interactor
getAliases, getAnnotations, getChecksums, getFullName, getIdentifiers, getInteractorType, getOrganism, getPreferredIdentifier, getPreferredName, getShortName, getXrefs, setFullName, setOrganism, setShortName

Methods inherited from interface java.lang.Iterable
forEach