Package psidev.psi.mi.jami.model.impl

Class DefaultPosition

java.lang.Object

psidev.psi.mi.jami.model.impl.DefaultPosition

All Implemented Interfaces:

Position

public class DefaultPosition
extends Object
implements Position

Default implementation for Position Notes: The equals and hashcode methods have been overridden to be consistent with UnambiguousPositionComparator

Since:

22/01/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Field Summary

Fields inherited from interface psidev.psi.mi.jami.model.Position

C_TERMINAL, C_TERMINAL_FULL, C_TERMINAL_MI, C_TERMINAL_RANGE, C_TERMINAL_RANGE_FULL, C_TERMINAL_RANGE_MI, CERTAIN, CERTAIN_FULL, CERTAIN_MI, GREATER_THAN, GREATER_THAN_FULL, GREATER_THAN_MI, LESS_THAN, LESS_THAN_FULL, LESS_THAN_MI, N_TERMINAL, N_TERMINAL_FULL, N_TERMINAL_MI, N_TERMINAL_RANGE, N_TERMINAL_RANGE_FULL, N_TERMINAL_RANGE_MI, RAGGED_N_TERMINAL, RAGGED_N_TERMINAL_MI, RANGE, RANGE_FULL, RANGE_MI, UNDETERMINED, UNDETERMINED_FULL, UNDETERMINED_MI

Constructor Summary

Constructors

Constructor	Description
DefaultPosition(long position)	This constructor will create an undetermined status if the position is 0 and a certain status if the position is not 0.
DefaultPosition(long start, long end)	Create a new Position with status = range.
DefaultPosition(CvTerm status, long position)	Constructor for DefaultPosition.
DefaultPosition(CvTerm status, long start, long end)	Constructor for DefaultPosition.

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
long	getEnd()	Getter for the field end.
long	getStart()	Getter for the field start.
CvTerm	getStatus()	Getter for the field status.
int	hashCode()
boolean	isPositionUndetermined()	isPositionUndetermined
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

DefaultPosition

public DefaultPosition(long start,
                       long end)

Create a new Position with status = range.

Parameters:

start - : the fuzzy start

end - : the fuzzy end

DefaultPosition

public DefaultPosition(CvTerm status,
                       long start,
                       long end)

Constructor for DefaultPosition.

Parameters:

status - a CvTerm object.

start - a long.

end - a long.

DefaultPosition

public DefaultPosition(CvTerm status,
                       long position)

Constructor for DefaultPosition.

Parameters:

status - a CvTerm object.

position - a long.

DefaultPosition

public DefaultPosition(long position)

This constructor will create an undetermined status if the position is 0 and a certain status if the position is not 0.

Parameters:

position - a long.

Method Detail

getStatus

public CvTerm getStatus()

Getter for the field status.

Specified by:

getStatus in interface Position

Returns:

a CvTerm object.

getStart

public long getStart()

Getter for the field start.

Specified by:

getStart in interface Position

Returns:

a long.

getEnd

public long getEnd()

Getter for the field end.

Specified by:

getEnd in interface Position

Returns:

a long.

isPositionUndetermined

public boolean isPositionUndetermined()

isPositionUndetermined

Specified by:

isPositionUndetermined in interface Position

Returns:

a boolean.

equals

public boolean equals(Object o)

Overrides:

equals in class Object

toString

public String toString()

Overrides:

toString in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object