Package psidev.psi.mi.jami.utils.comparator.cooperativity

Class UnambiguousCooperativeEffectBaseComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.cooperativity.CooperativeEffectBaseComparator

psidev.psi.mi.jami.utils.comparator.cooperativity.UnambiguousCooperativeEffectBaseComparator

All Implemented Interfaces:

Comparator<CooperativeEffect>

public class UnambiguousCooperativeEffectBaseComparator
extends CooperativeEffectBaseComparator

Unambiguous comparator for CooperativeEffect It will first compare the outcome using UnambiguousCvTermComparator. Then it will compare the response using UnambiguousCvTermComparator. Then it will compare the CooperativityEvidences using UnambiguousCooperativityEvidenceComparator. Finally it will compare the affected interactions using UnambiguousModelledInteractionComparator

Since:

23/05/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousCooperativeEffectBaseComparator()	Constructor for UnambiguousCooperativeEffectBaseComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(CooperativeEffect effect1, CooperativeEffect effect2)	Use UnambiguousCooperativeEffectBaseComparator to know if two CooperativeEffects are equals.
int	compare(CooperativeEffect effect1, CooperativeEffect effect2)	It will first compare the outcome using UnambiguousCvTermComparator.
UnambiguousCvTermComparator	getCvTermComparator()	Getter for the field cvTermComparator.
static int	hashCode(CooperativeEffect effect)	hashCode

Methods inherited from class psidev.psi.mi.jami.utils.comparator.cooperativity.CooperativeEffectBaseComparator

getCooperativityEvidenceCollectionComparator, getModelledInteractionCollectionComparator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousCooperativeEffectBaseComparator

public UnambiguousCooperativeEffectBaseComparator()

Constructor for UnambiguousCooperativeEffectBaseComparator.

Method Detail

getCvTermComparator

public UnambiguousCvTermComparator getCvTermComparator()

Getter for the field cvTermComparator.

Overrides:

getCvTermComparator in class CooperativeEffectBaseComparator

Returns:

a Comparator object.

compare

public int compare(CooperativeEffect effect1,
                   CooperativeEffect effect2)

It will first compare the outcome using UnambiguousCvTermComparator. Then it will compare the response using UnambiguousCvTermComparator. Then it will compare the CooperativityEvidences using UnambiguousCooperativityEvidenceComparator. Finally it will compare the affected interactions using UnambiguousModelledInteractionComparator

Specified by:

compare in interface Comparator<CooperativeEffect>

Overrides:

compare in class CooperativeEffectBaseComparator

Parameters:

effect1 - a CooperativeEffect object.

effect2 - a CooperativeEffect object.

Returns:

a int.

areEquals

public static boolean areEquals(CooperativeEffect effect1,
                                CooperativeEffect effect2)

Use UnambiguousCooperativeEffectBaseComparator to know if two CooperativeEffects are equals.

Parameters:

effect1 - a CooperativeEffect object.

effect2 - a CooperativeEffect object.

Returns:

true if the two CooperativeEffects are equal

hashCode

public static int hashCode(CooperativeEffect effect)

hashCode

Parameters:

effect - a CooperativeEffect object.

Returns:

the hashcode consistent with the equals method for this comparator