Package psidev.psi.mi.jami.utils.comparator.interaction

Class UnambiguousCuratedModelledInteractionComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.interaction.ModelledInteractionComparator

psidev.psi.mi.jami.utils.comparator.interaction.CuratedModelledInteractionComparator

psidev.psi.mi.jami.utils.comparator.interaction.UnambiguousCuratedModelledInteractionComparator

All Implemented Interfaces:

Comparator<ModelledInteraction>

public class UnambiguousCuratedModelledInteractionComparator
extends CuratedModelledInteractionComparator

Unambiguous curated ModelledInteraction comparator. It will use a UnambiguousCuratedInteractionBase to compare basic interaction properties. Then it will compare the modelledParticipants using UnambiguousModelledParticipantComparator. Finally, it will compare the source of the modelledInteraction using UnambiguousCvTermComparator

Since:

21/01/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousCuratedModelledInteractionComparator()	Creates a new UnambiguousCuratedModelledInteractionComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(ModelledInteraction interaction1, ModelledInteraction interaction2)	Use UnambiguousCuratedModelledInteractionComparator to know if two modelled interactions are equals.
int	compare(ModelledInteraction interaction1, ModelledInteraction interaction2)	It will use a UnambiguousCuratedInteractionBase to compare basic interaction properties.
UnambiguousCuratedInteractionBaseComparator	getInteractionBaseComparator()	Getter for the field interactionBaseComparator.
UnambiguousCvTermComparator	getSourceComparator()	Getter for the field sourceComparator.

Methods inherited from class psidev.psi.mi.jami.utils.comparator.interaction.ModelledInteractionComparator

getParticipantCollectionComparator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousCuratedModelledInteractionComparator

public UnambiguousCuratedModelledInteractionComparator()

Creates a new UnambiguousCuratedModelledInteractionComparator. It will use a UnambiguousInteractionBaseComparator to compare basic interaction properties

Method Detail

getInteractionBaseComparator

public UnambiguousCuratedInteractionBaseComparator getInteractionBaseComparator()

Getter for the field interactionBaseComparator.

Overrides:

getInteractionBaseComparator in class ModelledInteractionComparator

Returns:

a Comparator object.

getSourceComparator

public UnambiguousCvTermComparator getSourceComparator()

Description copied from class: CuratedModelledInteractionComparator

Getter for the field sourceComparator.

Overrides:

getSourceComparator in class CuratedModelledInteractionComparator

Returns:

a Comparator object.

compare

public int compare(ModelledInteraction interaction1,
                   ModelledInteraction interaction2)

It will use a UnambiguousCuratedInteractionBase to compare basic interaction properties. Then it will compare the modelledParticipants using UnambiguousModelledParticipantComparator. Finally, it will compare the source of the modelledInteraction using UnambiguousCvTermComparator

Specified by:

compare in interface Comparator<ModelledInteraction>

Overrides:

compare in class CuratedModelledInteractionComparator

Parameters:

interaction1 - a ModelledInteraction object.

interaction2 - a ModelledInteraction object.

Returns:

a int.

areEquals

public static boolean areEquals(ModelledInteraction interaction1,
                                ModelledInteraction interaction2)

Use UnambiguousCuratedModelledInteractionComparator to know if two modelled interactions are equals.

Parameters:

interaction1 - a ModelledInteraction object.

interaction2 - a ModelledInteraction object.

Returns:

true if the two modelled interactions are equal