Package psidev.psi.mi.jami.utils.comparator.interaction

Class UnambiguousExactCuratedInteractionComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.interaction.InteractionComparator

psidev.psi.mi.jami.utils.comparator.interaction.UnambiguousExactCuratedInteractionComparator

All Implemented Interfaces:

Comparator<Interaction>

public class UnambiguousExactCuratedInteractionComparator
extends InteractionComparator

Unambiguous exact curated Generic interaction comparator. Modelled interactions come first and then experimental interactions - It uses UnambiguousExactCuratedInteractionEvidenceComparator to compare experimental interactions - It uses UnambiguousExactCuratedModelledInteractionComparator to compare modelled interactions - It uses UnambiguousCuratedInteractionBaseComparator to compare basic interaction properties

Since:

05/02/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousExactCuratedInteractionComparator()	Creates a new UnambiguousExactCuratedInteractionComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(Interaction interaction1, Interaction interaction2)	Use UnambiguousExactCuratedInteractionComparator to know if two interactions are equals.
int	compare(Interaction interaction1, Interaction interaction2)	Modelled interactions come first and then experimental interactions - It uses UnambiguousExactCuratedInteractionEvidenceComparator to compare experimental interactions - It uses UnambiguousExactCuratedModelledInteractionComparator to compare modelled interactions - It uses UnambiguousCuratedInteractionBaseComparator to compare basic interaction properties
UnambiguousExactCuratedInteractionEvidenceComparator	getExperimentalInteractionComparator()	Getter for the field experimentalInteractionComparator.
UnambiguousCuratedInteractionBaseComparator	getInteractionBaseComparator()	Getter for the field interactionBaseComparator.
UnambiguousExactCuratedModelledInteractionComparator	getModelledInteractionComparator()	Getter for the field modelledInteractionComparator.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousExactCuratedInteractionComparator

public UnambiguousExactCuratedInteractionComparator()

Creates a new UnambiguousExactCuratedInteractionComparator.

Method Detail

getInteractionBaseComparator

public UnambiguousCuratedInteractionBaseComparator getInteractionBaseComparator()

Getter for the field interactionBaseComparator.

Overrides:

getInteractionBaseComparator in class InteractionComparator

Returns:

a Comparator object.

getExperimentalInteractionComparator

public UnambiguousExactCuratedInteractionEvidenceComparator getExperimentalInteractionComparator()

Getter for the field experimentalInteractionComparator.

Overrides:

getExperimentalInteractionComparator in class InteractionComparator

Returns:

a InteractionEvidenceComparator object.

getModelledInteractionComparator

public UnambiguousExactCuratedModelledInteractionComparator getModelledInteractionComparator()

Description copied from class: InteractionComparator

Getter for the field modelledInteractionComparator.

Overrides:

getModelledInteractionComparator in class InteractionComparator

Returns:

a ModelledInteractionComparator object.

compare

public int compare(Interaction interaction1,
                   Interaction interaction2)

Modelled interactions come first and then experimental interactions - It uses UnambiguousExactCuratedInteractionEvidenceComparator to compare experimental interactions - It uses UnambiguousExactCuratedModelledInteractionComparator to compare modelled interactions - It uses UnambiguousCuratedInteractionBaseComparator to compare basic interaction properties

Specified by:

compare in interface Comparator<Interaction>

Overrides:

compare in class InteractionComparator

Parameters:

interaction1 - a Interaction object.

interaction2 - a Interaction object.

Returns:

a int.

areEquals

public static boolean areEquals(Interaction interaction1,
                                Interaction interaction2)

Use UnambiguousExactCuratedInteractionComparator to know if two interactions are equals.

Parameters:

interaction1 - a Interaction object.

interaction2 - a Interaction object.

Returns:

true if the two interactions are equal