Package psidev.psi.mi.jami.utils.comparator.interactor

Class ComplexComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.interactor.ComplexComparator

All Implemented Interfaces:

Comparator<Complex>

Direct Known Subclasses:

UnambiguousComplexComparator, UnambiguousExactComplexComparator

public class ComplexComparator
extends Object
implements Comparator<Complex>

Basic ComplexComparator. It will first look at the default properties of an interactor using AbstractInteractorBaseComparator. It will then compare the interaction types using AbstractCvtermComparator If the basic interactor properties are the same, It will first compare the collection of components using ModelledParticipantComparator.

Since:

17/01/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
ComplexComparator(Comparator<Interactor> interactorBaseComparator, CustomizableModelledParticipantComparator componentComparator, Comparator<CvTerm> cvTermComparator)	Creates a bew ComplexComparator.
ComplexComparator(Comparator<Interactor> interactorBaseComparator, ModelledParticipantCollectionComparator componentComparator, Comparator<CvTerm> cvTermComparator)	Creates a bew ComplexComparator.

Method Summary

Modifier and Type	Method	Description
int	compare(Complex complex1, Complex complex2)	It will first look at the default properties of an interactor using AbstractInteractorBaseComparator.
ModelledParticipantCollectionComparator	getComponentCollectionComparator()	Getter for the field componentCollectionComparator.
Comparator<CvTerm>	getCvTermComparator()	Getter for the field cvTermComparator.
Comparator<Interactor>	getInteractorBaseComparator()	Getter for the field interactorBaseComparator.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

ComplexComparator

public ComplexComparator(Comparator<Interactor> interactorBaseComparator,
                         CustomizableModelledParticipantComparator componentComparator,
                         Comparator<CvTerm> cvTermComparator)

Creates a bew ComplexComparator. It needs a AbstractInteractorBaseComparator to compares interactor properties

Parameters:

interactorBaseComparator - a Comparator object.

componentComparator - a CustomizableModelledParticipantComparator object.

cvTermComparator - a Comparator object.

ComplexComparator

public ComplexComparator(Comparator<Interactor> interactorBaseComparator,
                         ModelledParticipantCollectionComparator componentComparator,
                         Comparator<CvTerm> cvTermComparator)

Creates a bew ComplexComparator. It needs a AbstractInteractorBaseComparator to compares interactor properties

Parameters:

interactorBaseComparator - a Comparator object.

componentComparator - a ModelledParticipantCollectionComparator object.

cvTermComparator - a Comparator object.

Method Detail

compare

public int compare(Complex complex1,
                   Complex complex2)

It will first look at the default properties of an interactor using AbstractInteractorBaseComparator. It will then compare the interaction types using AbstractCvtermComparator If the basic interactor properties are the same, It will first compare the collection of components using ComponentComparator.

Specified by:

compare in interface Comparator<Complex>

Parameters:

complex1 - a Complex object.

complex2 - a Complex object.

Returns:

a int.

getInteractorBaseComparator

public Comparator<Interactor> getInteractorBaseComparator()

Getter for the field interactorBaseComparator.

Returns:

a Comparator object.

getComponentCollectionComparator

public ModelledParticipantCollectionComparator getComponentCollectionComparator()

Getter for the field componentCollectionComparator.

Returns:

a ModelledParticipantCollectionComparator object.

getCvTermComparator

public Comparator<CvTerm> getCvTermComparator()

Getter for the field cvTermComparator.

Returns:

a Comparator object.