Package psidev.psi.mi.jami.utils.comparator.interactor

Class UnambiguousComplexComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.interactor.ComplexComparator

psidev.psi.mi.jami.utils.comparator.interactor.UnambiguousComplexComparator

All Implemented Interfaces:

Comparator<Complex>

public class UnambiguousComplexComparator
extends ComplexComparator

Unambiguous Complex comparator

It will first look at the default properties of an interactor using UnambiguousInteractorBaseComparator. It will then compare interaction types using UnambiguousCvTermComparator. If the basic interactor properties are the same, It will first compare the collection of components using UnambiguousModelledParticipantComparator.

Since:

17/01/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousComplexComparator()
UnambiguousComplexComparator(UnambiguousModelledParticipantComparator comparator)	Constructor for UnambiguousComplexComparator.
UnambiguousComplexComparator(UnambiguousModelledParticipantInteractorComparator comparator)	Constructor for UnambiguousComplexComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(Complex complex1, Complex complex2)	Use UnambiguousComplexComparator to know if two complexes are equals.
int	compare(Complex complex1, Complex complex2)	It will first look at the default properties of an interactor using AbstractInteractorBaseComparator.
UnambiguousCvTermComparator	getCvTermComparator()	Getter for the field cvTermComparator.
UnambiguousInteractorBaseComparator	getInteractorBaseComparator()	Getter for the field interactorBaseComparator.

Methods inherited from class psidev.psi.mi.jami.utils.comparator.interactor.ComplexComparator

getComponentCollectionComparator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousComplexComparator

public UnambiguousComplexComparator()

Creates a new UnambiguousComplexComparator. It will use a UnambiguousInteractorBaseComparator, UnambiguousModelledParticipantComparator to compares components.

UnambiguousComplexComparator

public UnambiguousComplexComparator(UnambiguousModelledParticipantComparator comparator)

Constructor for UnambiguousComplexComparator.

Parameters:

comparator - a UnambiguousModelledParticipantComparator object.

UnambiguousComplexComparator

public UnambiguousComplexComparator(UnambiguousModelledParticipantInteractorComparator comparator)

Constructor for UnambiguousComplexComparator.

Parameters:

comparator - a UnambiguousModelledParticipantInteractorComparator object.

Method Detail

areEquals

public static boolean areEquals(Complex complex1,
                                Complex complex2)

Use UnambiguousComplexComparator to know if two complexes are equals.

Parameters:

complex1 - a Complex object.

complex2 - a Complex object.

Returns:

true if the two complexes are equal

compare

public int compare(Complex complex1,
                   Complex complex2)

It will first look at the default properties of an interactor using AbstractInteractorBaseComparator. It will then compare the interaction types using AbstractCvtermComparator If the basic interactor properties are the same, It will first compare the collection of components using ComponentComparator. It will first look at the default properties of an interactor using UnambiguousInteractorBaseComparator. It will then compare interaction types using UnambiguousCvTermComparator. If the basic interactor properties are the same, It will first compare the collection of components using UnambiguousModelledParticipantComparator.

Specified by:

compare in interface Comparator<Complex>

Overrides:

compare in class ComplexComparator

Parameters:

complex1 - a Complex object.

complex2 - a Complex object.

Returns:

a int.

getInteractorBaseComparator

public UnambiguousInteractorBaseComparator getInteractorBaseComparator()

Getter for the field interactorBaseComparator.

Overrides:

getInteractorBaseComparator in class ComplexComparator

Returns:

a Comparator object.

getCvTermComparator

public UnambiguousCvTermComparator getCvTermComparator()

Getter for the field cvTermComparator.

Overrides:

getCvTermComparator in class ComplexComparator

Returns:

a Comparator object.