Package psidev.psi.mi.jami.utils.comparator.participant

Class UnambiguousExperimentalEntityComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.participant.ExperimentalEntityComparator

psidev.psi.mi.jami.utils.comparator.participant.UnambiguousExperimentalEntityComparator

All Implemented Interfaces:

Comparator<ExperimentalEntity>

public class UnambiguousExperimentalEntityComparator
extends ExperimentalEntityComparator

Unambiguous Experimental entity comparator.

Since:

18/01/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousExperimentalEntityComparator()	Creates a new UnambiguousExperimentalEntityComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(ExperimentalEntity experimentalParticipant1, ExperimentalEntity component2)	Use UnambiguousExperimentalEntityComparator to know if two experimental participants are equals.
int	compare(ExperimentalEntity experimentalParticipant1, ExperimentalEntity experimentalParticipant2)	It will compare the basic properties of an experimental entity using EntityBaseComparator and FeatureEvidenceComparator.
UnambiguousEntityBaseComparator	getParticipantBaseComparator()	Getter for the field participantBaseComparator.

Methods inherited from class psidev.psi.mi.jami.utils.comparator.participant.ExperimentalEntityComparator

getFeatureCollectionComparator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousExperimentalEntityComparator

public UnambiguousExperimentalEntityComparator()

Creates a new UnambiguousExperimentalEntityComparator. It will use a UnambiguousParticipantBaseComparator to compare the basic properties of a participant, a UnambiguousCvTermComparator to compare experimental roles, preparations and identification methods and a UnambiguousOrganismComparator to compare expressed in organisms

Method Detail

getParticipantBaseComparator

public UnambiguousEntityBaseComparator getParticipantBaseComparator()

Description copied from class: ExperimentalEntityComparator

Getter for the field participantBaseComparator.

Overrides:

getParticipantBaseComparator in class ExperimentalEntityComparator

Returns:

a EntityBaseComparator object.

compare

public int compare(ExperimentalEntity experimentalParticipant1,
                   ExperimentalEntity experimentalParticipant2)

Description copied from class: ExperimentalEntityComparator

It will compare the basic properties of an experimental entity using EntityBaseComparator and FeatureEvidenceComparator.

Specified by:

compare in interface Comparator<ExperimentalEntity>

Overrides:

compare in class ExperimentalEntityComparator

Parameters:

experimentalParticipant1 - a ExperimentalEntity object.

experimentalParticipant2 - a ExperimentalEntity object.

Returns:

a int.

areEquals

public static boolean areEquals(ExperimentalEntity experimentalParticipant1,
                                ExperimentalEntity component2)

Use UnambiguousExperimentalEntityComparator to know if two experimental participants are equals.

Parameters:

experimentalParticipant1 - a ExperimentalEntity object.

component2 - a ExperimentalEntity object.

Returns:

true if the two experimental participants are equal