Uses of Interface
psidev.psi.mi.jami.xml.io.writer.elements.PsiXmlPublicationWriter

Packages that use PsiXmlPublicationWriter

Package	Description
psidev.psi.mi.jami.xml.io.writer.elements
psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts
psidev.psi.mi.jami.xml.io.writer.elements.impl.extended.xml25
psidev.psi.mi.jami.xml.io.writer.elements.impl.extended.xml30
psidev.psi.mi.jami.xml.io.writer.elements.impl.xml25
psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30

Uses of PsiXmlPublicationWriter in psidev.psi.mi.jami.xml.io.writer.elements

Methods in psidev.psi.mi.jami.xml.io.writer.elements that return PsiXmlPublicationWriter

Modifier and Type	Method	Description
static PsiXmlPublicationWriter	PsiXmlElementWriterFactory.createPublicationWriter(XMLStreamWriter streamWriter, boolean extended, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlXrefWriter primaryRefWriter, PsiXmlVersion version)	createPublicationWriter.

Methods in psidev.psi.mi.jami.xml.io.writer.elements with parameters of type PsiXmlPublicationWriter

Modifier and Type	Method	Description
static PsiXmlElementWriter<Allostery>	PsiXmlElementWriterFactory.createAllosteryWriter(XMLStreamWriter streamWriter, boolean expanded, PsiXmlObjectCache objectIndex, PsiXmlVariableNameWriter<CvTerm> cvWriter, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlPublicationWriter publicationWriter)	createAllosteryWriter.
static PsiXmlElementWriter<Confidence>[]	PsiXmlElementWriterFactory.createConfidenceWriters(XMLStreamWriter streamWriter, boolean extended, PsiXmlObjectCache objectIndex, PsiXmlVersion version, PsiXmlVariableNameWriter<CvTerm> confidenceTypeWriter, PsiXmlPublicationWriter publicationWriter)	createConfidenceWriters.
static PsiXmlElementWriter<CooperativityEvidence>	PsiXmlElementWriterFactory.createCooperativityEvidenceWriter(XMLStreamWriter streamWriter, boolean expanded, PsiXmlVariableNameWriter<CvTerm> cvWriter, PsiXmlPublicationWriter publicationWriter)	createCooperativityEvidenceWriter.
static PsiXmlInteractionWriter[]	PsiXmlElementWriterFactory.createDefaultPsiXmlInteractionWriters(XMLStreamWriter streamWriter, PsiXmlObjectCache objectIndex, PsiXmlVersion version, PsiXmlType xmlType, InteractionCategory interactionCategory, ComplexType complexType, PsiXmlElementWriter<Alias> aliasWriter, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlXrefWriter primaryRefWriter, PsiXmlElementWriter[] confidenceWriters, PsiXmlElementWriter<Checksum> checksumWriter, PsiXmlVariableNameWriter<CvTerm> interactionTypeWriter, PsiXmlExperimentWriter experimentWriter, PsiXmlElementWriter<String> availabilityWriter, PsiXmlParameterWriter[] parameterWriters, PsiXmlParticipantWriter[] participantWriters, PsiXmlElementWriter inferredInteractionWriter, PsiXmlPublicationWriter publicationWriter, PsiXmlVariableNameWriter<CvTerm> openCvWriter)	createDefaultPsiXmlInteractionWriters.
static PsiXmlExperimentWriter	PsiXmlElementWriterFactory.createExperimentWriter(XMLStreamWriter streamWriter, boolean extended, PsiXmlObjectCache objectIndex, PsiXmlVersion version, boolean named, PsiXmlElementWriter<Alias> aliasWriter, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlXrefWriter primaryRefWriter, PsiXmlPublicationWriter publicationWriter, PsiXmlElementWriter<Organism> nonExperimentalHostOrganismWriter, PsiXmlVariableNameWriter<CvTerm> detectionMethodWriter, PsiXmlElementWriter<Confidence> confidenceWriter)	createExperimentWriter.
static PsiXmlInteractionWriter[]	PsiXmlElementWriterFactory.createExtendedPsiXmlInteractionWriters(XMLStreamWriter streamWriter, PsiXmlObjectCache objectIndex, PsiXmlVersion version, PsiXmlType xmlType, InteractionCategory interactionCategory, ComplexType complexType, PsiXmlElementWriter<Alias> aliasWriter, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlXrefWriter primaryRefWriter, PsiXmlElementWriter[] confidenceWriters, PsiXmlElementWriter<Checksum> checksumWriter, PsiXmlVariableNameWriter<CvTerm> interactionTypeWriter, PsiXmlExperimentWriter experimentWriter, PsiXmlElementWriter<String> availabilityWriter, PsiXmlParameterWriter[] parameterWriters, PsiXmlParticipantWriter[] participantWriters, PsiXmlElementWriter inferredInteractionWriter, PsiXmlPublicationWriter publicationWriter, PsiXmlVariableNameWriter<CvTerm> openCvWriter)	createExtendedPsiXmlInteractionWriters.
static PsiXmlInteractionWriter[]	PsiXmlElementWriterFactory.createInteractionWritersFor(XMLStreamWriter streamWriter, PsiXmlObjectCache objectIndex, PsiXmlVersion version, PsiXmlType xmlType, InteractionCategory interactionCategory, ComplexType complexType, boolean extended, boolean named, PsiXmlElementWriter<Alias> aliasWriter, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlXrefWriter primaryRefWriter, PsiXmlElementWriter[] confidenceWriters, PsiXmlElementWriter<Checksum> checksumWriter, PsiXmlVariableNameWriter<CvTerm> interactionTypeWriter, PsiXmlVariableNameWriter<CvTerm> openCvWriter, PsiXmlExperimentWriter experimentWriter, PsiXmlElementWriter<String> availabilityWriter, PsiXmlElementWriter<Interactor> interactorWriter, PsiXmlPublicationWriter publicationWriter)	createInteractionWritersFor.
static PsiXmlInteractionWriter[]	PsiXmlElementWriterFactory.createNamedPsiXmlInteractionWriters(XMLStreamWriter streamWriter, PsiXmlObjectCache objectIndex, PsiXmlVersion version, PsiXmlType xmlType, InteractionCategory interactionCategory, ComplexType complexType, PsiXmlElementWriter<Alias> aliasWriter, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlXrefWriter primaryRefWriter, PsiXmlElementWriter[] confidenceWriters, PsiXmlElementWriter<Checksum> checksumWriter, PsiXmlVariableNameWriter<CvTerm> interactionTypeWriter, PsiXmlExperimentWriter experimentWriter, PsiXmlElementWriter<String> availabilityWriter, PsiXmlParameterWriter[] parameterWriters, PsiXmlParticipantWriter[] participantWriters, PsiXmlElementWriter inferredInteractionWriter, PsiXmlPublicationWriter publicationWriter, PsiXmlVariableNameWriter<CvTerm> openCvWriter)	createNamedPsiXmlInteractionWriters.
static PsiXmlParameterWriter[]	PsiXmlElementWriterFactory.createParameterWriters(XMLStreamWriter streamWriter, boolean extended, PsiXmlObjectCache objectIndex, PsiXmlVersion version, PsiXmlPublicationWriter publicationWriter)	createParameterWriters.
static PsiXmlElementWriter<Preassembly>	PsiXmlElementWriterFactory.createPreassemblyWriter(XMLStreamWriter streamWriter, boolean extended, PsiXmlObjectCache objectIndex, PsiXmlVariableNameWriter<CvTerm> cvWriter, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlPublicationWriter publicationWriter)	createPreassemblyWriter.
static PsiXmlSourceWriter	PsiXmlElementWriterFactory.createSourceWriter(XMLStreamWriter streamWriter, boolean extended, PsiXmlVersion version, PsiXmlElementWriter<Alias> aliasWriter, PsiXmlElementWriter<Annotation> attributeWriter, PsiXmlXrefWriter primaryRefWriter, PsiXmlPublicationWriter publicationWriter)	createSourceWriter.

Uses of PsiXmlPublicationWriter in psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts

Classes in psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts that implement PsiXmlPublicationWriter

Modifier and Type	Class	Description
class	AbstractXmlPublicationWriter	Abstract Xml writer for publications (bibref objects)

Methods in psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts that return PsiXmlPublicationWriter

Modifier and Type	Method	Description
PsiXmlPublicationWriter	AbstractXmlExperimentWriter.getPublicationWriter()	Getter for the field publicationWriter.

Methods in psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts with parameters of type PsiXmlPublicationWriter

Modifier and Type	Method	Description
void	AbstractXmlExperimentWriter.setPublicationWriter(PsiXmlPublicationWriter publicationWriter)	Setter for the field publicationWriter.

Uses of PsiXmlPublicationWriter in psidev.psi.mi.jami.xml.io.writer.elements.impl.extended.xml25

Classes in psidev.psi.mi.jami.xml.io.writer.elements.impl.extended.xml25 that implement PsiXmlPublicationWriter

Modifier and Type	Class	Description
class	XmlPublicationWriter	Xml25 writer for publications (bibref objects)

Uses of PsiXmlPublicationWriter in psidev.psi.mi.jami.xml.io.writer.elements.impl.extended.xml30

Classes in psidev.psi.mi.jami.xml.io.writer.elements.impl.extended.xml30 that implement PsiXmlPublicationWriter

Modifier and Type	Class	Description
class	XmlPublicationWriter	Xml30 writer for publications (bibref objects)

Uses of PsiXmlPublicationWriter in psidev.psi.mi.jami.xml.io.writer.elements.impl.xml25

Classes in psidev.psi.mi.jami.xml.io.writer.elements.impl.xml25 that implement PsiXmlPublicationWriter

Modifier and Type	Class	Description
class	XmlPublicationWriter	Xml25 writer for publications (bibref objects)

Uses of PsiXmlPublicationWriter in psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30

Classes in psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30 that implement PsiXmlPublicationWriter

Modifier and Type	Class	Description
class	XmlPublicationWriter	Xml30 writer for publications (bibref objects)

Methods in psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30 that return PsiXmlPublicationWriter

Modifier and Type	Method	Description
PsiXmlPublicationWriter	XmlModelledConfidenceWriter.getPublicationWriter()	Getter for the field publicationWriter.
PsiXmlPublicationWriter	XmlModelledParameterWriter.getPublicationWriter()	Getter for the field publicationWriter.

Methods in psidev.psi.mi.jami.xml.io.writer.elements.impl.xml30 with parameters of type PsiXmlPublicationWriter

Modifier and Type	Method	Description
void	XmlModelledConfidenceWriter.setPublicationWriter(PsiXmlPublicationWriter publicationWriter)	Setter for the field publicationWriter.
void	XmlModelledParameterWriter.setPublicationWriter(PsiXmlPublicationWriter publicationWriter)	Setter for the field publicationWriter.