Package psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml30

Class AbstractXmlParticipantCandidateWriter<P extends ParticipantCandidate,F extends Feature>

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml30.AbstractXmlParticipantCandidateWriter<P,F>

All Implemented Interfaces:

PsiXmlElementWriter<P>

Direct Known Subclasses:

XmlExperimentalParticipantCandidateWriter, XmlExperimentalParticipantCandidateWriter, XmlExperimentalParticipantCandidateWriter, XmlExperimentalParticipantCandidateWriter, XmlModelledParticipantCandidateWriter, XmlModelledParticipantCandidateWriter, XmlModelledParticipantCandidateWriter, XmlModelledParticipantCandidateWriter

public abstract class AbstractXmlParticipantCandidateWriter<P extends ParticipantCandidate,F extends Feature>
extends Object
implements PsiXmlElementWriter<P>

Abstract Xml writer for participant candidate

Since:

12/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
AbstractXmlParticipantCandidateWriter(XMLStreamWriter writer, PsiXmlObjectCache objectIndex)	Constructor for AbstractXmlParticipantCandidateWriter.

Method Summary

Modifier and Type	Method	Description
PsiXmlElementWriter<F>	getFeatureWriter()	Getter for the field featureWriter.
PsiXmlElementWriter<Interactor>	getInteractorWriter()	Getter for the field interactorWriter.
protected PsiXmlObjectCache	getObjectIndex()	Getter for the field objectIndex.
protected XMLStreamWriter	getStreamWriter()	Getter for the field streamWriter.
protected abstract void	initialiseFeatureWriter()	initialiseFeatureWriter.
protected abstract void	initialiseInteractorWriter()	initialiseInteractorWriter.
void	setFeatureWriter(PsiXmlElementWriter<F> featureWriter)	Setter for the field featureWriter.
void	setInteractorWriter(PsiXmlElementWriter<Interactor> interactorWriter)	Setter for the field interactorWriter.
void	write(P object)	write.
protected void	writeFeatures(P object)	writeFeatures.
protected void	writeInteractor(P object)	writeInteractor.
protected abstract void	writeMolecule(Interactor interactor)	writeMolecule.
protected void	writeMoleculeDescription(Interactor interactor)	writeMoleculeDescription.
protected void	writeMoleculeRef(Interactor interactor)	writeMoleculeRef.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AbstractXmlParticipantCandidateWriter

public AbstractXmlParticipantCandidateWriter(XMLStreamWriter writer,
                                             PsiXmlObjectCache objectIndex)

Constructor for AbstractXmlParticipantCandidateWriter.

Parameters:

writer - a XMLStreamWriter object.

objectIndex - a PsiXmlObjectCache object.

Method Detail

getInteractorWriter

public PsiXmlElementWriter<Interactor> getInteractorWriter()

Getter for the field interactorWriter.

Returns:

a PsiXmlElementWriter object.

initialiseInteractorWriter

protected abstract void initialiseInteractorWriter()

initialiseInteractorWriter.

setInteractorWriter

public void setInteractorWriter(PsiXmlElementWriter<Interactor> interactorWriter)

Setter for the field interactorWriter.

Parameters:

interactorWriter - a PsiXmlElementWriter object.

getFeatureWriter

public PsiXmlElementWriter<F> getFeatureWriter()

Getter for the field featureWriter.

Returns:

a PsiXmlElementWriter object.

initialiseFeatureWriter

protected abstract void initialiseFeatureWriter()

initialiseFeatureWriter.

setFeatureWriter

public void setFeatureWriter(PsiXmlElementWriter<F> featureWriter)

Setter for the field featureWriter.

Parameters:

featureWriter - a PsiXmlElementWriter object.

write

public void write(P object)
           throws MIIOException

write.

Specified by:

write in interface PsiXmlElementWriter<P extends ParticipantCandidate>

Parameters:

object - a T object.

Throws:

MIIOException - if any.

writeFeatures

protected void writeFeatures(P object)
                      throws XMLStreamException

writeFeatures.

Parameters:

object - a P object.

Throws:

XMLStreamException - if any.

writeInteractor

protected void writeInteractor(P object)
                        throws XMLStreamException

writeInteractor.

Parameters:

object - a P object.

Throws:

XMLStreamException - if any.

writeMolecule

protected abstract void writeMolecule(Interactor interactor)
                               throws XMLStreamException

writeMolecule.

Parameters:

interactor - a Interactor object.

Throws:

XMLStreamException - if any.

writeMoleculeRef

protected void writeMoleculeRef(Interactor interactor)
                         throws XMLStreamException

writeMoleculeRef.

Parameters:

interactor - a Interactor object.

Throws:

XMLStreamException - if any.

writeMoleculeDescription

protected void writeMoleculeDescription(Interactor interactor)
                                 throws XMLStreamException

writeMoleculeDescription.

Parameters:

interactor - a Interactor object.

Throws:

XMLStreamException - if any.

getStreamWriter

protected XMLStreamWriter getStreamWriter()

Getter for the field streamWriter.

Returns:

a XMLStreamWriter object.

getObjectIndex

protected PsiXmlObjectCache getObjectIndex()

Getter for the field objectIndex.

Returns:

a PsiXmlObjectCache object.