Package psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml25

Class XmlNamedModelledParticipantWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter<ModelledParticipant,ModelledFeature>

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlModelledParticipantWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlModelledParticipantWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml25.XmlModelledParticipantWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml25.XmlNamedModelledParticipantWriter

All Implemented Interfaces:

ExpandedPsiXmlElementWriter<ModelledParticipant>, PsiXmlElementWriter<ModelledParticipant>, PsiXmlParticipantWriter<ModelledParticipant>

Direct Known Subclasses:

XmlModelledParticipantWriter

public class XmlNamedModelledParticipantWriter
extends XmlModelledParticipantWriter

Expanded XML 2.5 writer for a named modelled participant having a fullname and a shortname. It ignores experimental details.

Since:

14/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
XmlNamedModelledParticipantWriter(PsiXmlVersion version, XMLStreamWriter writer, PsiXmlObjectCache objectIndex)	Constructor for XmlNamedModelledParticipantWriter.

Method Summary

Modifier and Type	Method	Description
protected void	writeNames(ModelledParticipant object)	writeNames.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml25.XmlModelledParticipantWriter

writeMolecule

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlModelledParticipantWriter

initialiseBiologicalRoleWriter, initialiseFeatureWriter, initialiseInteractorWriter, initialiseXrefWriter, writeOtherAttributes, writeParticipantPool, writeStoichiometry, writeStoichiometryAttribute

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlModelledParticipantWriter

writeConfidences, writeExperimentalInteractor, writeExperimentalPreparations, writeExperimentalRoles, writeHostOrganisms, writeParameters, writeParticipantIdentificationMethods

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter

getAliasWriter, getAttributeWriter, getBiologicalRoleWriter, getFeatureWriter, getInteractorWriter, getObjectIndex, getStreamWriter, getVersion, getXrefWriter, setAliasWriter, setAttributeWriter, setBiologicalRoleWriter, setComplexAsInteractor, setFeatureWriter, setInteractorWriter, setXrefWriter, write, writeAttributes, writeBiologicalRole, writeComplexAsInteractor, writeFeatures, writeInteractor, writeMoleculeDescription, writeMoleculeRef, writeParticipant, writeXref, writeXrefFromParticipantXrefs

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.xml.io.writer.elements.PsiXmlElementWriter

write

Constructor Detail

XmlNamedModelledParticipantWriter

public XmlNamedModelledParticipantWriter(PsiXmlVersion version,
                                         XMLStreamWriter writer,
                                         PsiXmlObjectCache objectIndex)

Constructor for XmlNamedModelledParticipantWriter.

Parameters:

version - a PsiXmlVersion object.

writer - a XMLStreamWriter object.

objectIndex - a PsiXmlObjectCache object.

Method Detail

writeNames

protected void writeNames(ModelledParticipant object)
                   throws XMLStreamException

writeNames.

Overrides:

writeNames in class AbstractXmlParticipantWriter<ModelledParticipant,ModelledFeature>

Parameters:

object - a P object.

Throws:

XMLStreamException - if any.