Package psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml25

Class XmlNamedParticipantWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter<Participant,Feature>

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlParticipantWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlNamedParticipantWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml25.XmlNamedParticipantWriter

All Implemented Interfaces:

ExpandedPsiXmlElementWriter<Participant>, PsiXmlElementWriter<Participant>, PsiXmlParticipantWriter<Participant>

Direct Known Subclasses:

XmlParticipantWriter

public class XmlNamedParticipantWriter
extends AbstractXmlNamedParticipantWriter
implements ExpandedPsiXmlElementWriter<Participant>

Expanded Xml 2.5 writer for a basic named participant with a shortname and a fullname. It ignores experimental details

Since:

14/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
XmlNamedParticipantWriter(PsiXmlVersion version, XMLStreamWriter writer, PsiXmlObjectCache objectIndex)	Constructor for XmlNamedParticipantWriter.

Method Summary

Modifier and Type	Method	Description
protected void	writeMolecule(Interactor interactor)	writeMolecule.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlNamedParticipantWriter

writeNames

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlParticipantWriter

initialiseBiologicalRoleWriter, initialiseFeatureWriter, initialiseInteractorWriter, initialiseXrefWriter, writeConfidences, writeExperimentalInteractor, writeExperimentalPreparations, writeExperimentalRoles, writeHostOrganisms, writeOtherAttributes, writeParameters, writeParticipantIdentificationMethods, writeParticipantPool, writeStoichiometry, writeStoichiometryAttribute

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter

getAliasWriter, getAttributeWriter, getBiologicalRoleWriter, getFeatureWriter, getInteractorWriter, getObjectIndex, getStreamWriter, getVersion, getXrefWriter, setAliasWriter, setAttributeWriter, setBiologicalRoleWriter, setComplexAsInteractor, setFeatureWriter, setInteractorWriter, setXrefWriter, write, writeAttributes, writeBiologicalRole, writeComplexAsInteractor, writeFeatures, writeInteractor, writeMoleculeDescription, writeMoleculeRef, writeParticipant, writeXref, writeXrefFromParticipantXrefs

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.xml.io.writer.elements.PsiXmlElementWriter

write

Constructor Detail

XmlNamedParticipantWriter

public XmlNamedParticipantWriter(PsiXmlVersion version,
                                 XMLStreamWriter writer,
                                 PsiXmlObjectCache objectIndex)

Constructor for XmlNamedParticipantWriter.

Parameters:

version - a PsiXmlVersion object.

writer - a XMLStreamWriter object.

objectIndex - a PsiXmlObjectCache object.

Method Detail

writeMolecule

protected void writeMolecule(Interactor interactor)
                      throws XMLStreamException

writeMolecule.

Specified by:

writeMolecule in class AbstractXmlParticipantWriter<Participant,Feature>

Parameters:

interactor - a Interactor object.

Throws:

XMLStreamException - if any.