Package psidev.psi.mi.jami.xml.io.writer.elements.impl.extended.expanded.xml25

Class XmlParticipantWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter<Participant,Feature>

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlParticipantWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlNamedParticipantWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml25.XmlNamedParticipantWriter

psidev.psi.mi.jami.xml.io.writer.elements.impl.extended.expanded.xml25.XmlParticipantWriter

All Implemented Interfaces:

ExpandedPsiXmlElementWriter<Participant>, PsiXmlElementWriter<Participant>, PsiXmlParticipantWriter<Participant>

public class XmlParticipantWriter
extends XmlNamedParticipantWriter

Compact XML 2.5 writer for a basic participant (ignore experimental details)

Since:

14/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
XmlParticipantWriter(PsiXmlVersion version, XMLStreamWriter writer, PsiXmlObjectCache objectIndex)	Constructor for XmlParticipantWriter.

Method Summary

Modifier and Type	Method	Description
protected void	initialiseBiologicalRoleWriter()	initialiseBiologicalRoleWriter.
protected void	initialiseFeatureWriter()	initialiseFeatureWriter.
protected void	initialiseInteractorWriter()	initialiseInteractorWriter.
protected void	initialiseXrefWriter()	initialiseXrefWriter.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml25.XmlNamedParticipantWriter

writeMolecule

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlNamedParticipantWriter

writeNames

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml25.AbstractXmlParticipantWriter

writeConfidences, writeExperimentalInteractor, writeExperimentalPreparations, writeExperimentalRoles, writeHostOrganisms, writeOtherAttributes, writeParameters, writeParticipantIdentificationMethods, writeParticipantPool, writeStoichiometry, writeStoichiometryAttribute

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter

getAliasWriter, getAttributeWriter, getBiologicalRoleWriter, getFeatureWriter, getInteractorWriter, getObjectIndex, getStreamWriter, getVersion, getXrefWriter, setAliasWriter, setAttributeWriter, setBiologicalRoleWriter, setComplexAsInteractor, setFeatureWriter, setInteractorWriter, setXrefWriter, write, writeAttributes, writeBiologicalRole, writeComplexAsInteractor, writeFeatures, writeInteractor, writeMoleculeDescription, writeMoleculeRef, writeParticipant, writeXref, writeXrefFromParticipantXrefs

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.xml.io.writer.elements.PsiXmlElementWriter

write

Constructor Detail

XmlParticipantWriter

public XmlParticipantWriter(PsiXmlVersion version,
                            XMLStreamWriter writer,
                            PsiXmlObjectCache objectIndex)

Constructor for XmlParticipantWriter.

Parameters:

version - a PsiXmlVersion object.

writer - a XMLStreamWriter object.

objectIndex - a PsiXmlObjectCache object.

Method Detail

initialiseXrefWriter

protected void initialiseXrefWriter()

initialiseXrefWriter.

Overrides:

initialiseXrefWriter in class AbstractXmlParticipantWriter

initialiseFeatureWriter

protected void initialiseFeatureWriter()

initialiseFeatureWriter.

Overrides:

initialiseFeatureWriter in class AbstractXmlParticipantWriter

initialiseBiologicalRoleWriter

protected void initialiseBiologicalRoleWriter()

initialiseBiologicalRoleWriter.

Overrides:

initialiseBiologicalRoleWriter in class AbstractXmlParticipantWriter

initialiseInteractorWriter

protected void initialiseInteractorWriter()

initialiseInteractorWriter.

Overrides:

initialiseInteractorWriter in class AbstractXmlParticipantWriter