Package psidev.psi.mi.jami.xml.io.writer.expanded

Class LightExpandedXmlNamedBinaryWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter<T>

psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter<BinaryInteraction>

psidev.psi.mi.jami.xml.io.writer.expanded.LightExpandedXmlNamedBinaryWriter

All Implemented Interfaces:

InteractionWriter<BinaryInteraction>

public class LightExpandedXmlNamedBinaryWriter
extends AbstractExpandedXmlWriter<BinaryInteraction>

Expanded PSI-XML writer for light binary interactions (no experimental evidences) having names. Participants, experiments and features are also assumed to have expanded names

Since:

19/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version)	Constructor for LightExpandedXmlNamedBinaryWriter.
LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version, File file)	Constructor for LightExpandedXmlNamedBinaryWriter.
LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version, OutputStream output)	Constructor for LightExpandedXmlNamedBinaryWriter.
LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version, Writer writer)	Constructor for LightExpandedXmlNamedBinaryWriter.
LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version, XMLStreamWriter streamWriter, PsiXmlObjectCache cache)	Constructor for LightExpandedXmlNamedBinaryWriter.

Method Summary

Modifier and Type	Method	Description
protected void	initialiseSubWriters()	initialiseSubWriters.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter

getInteractionType, initialiseDefaultElementCache, initialiseOptionalWriters, writeComplex, writeInteraction, writeStartEntryContent

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter

close, end, extractSourceFromInteraction, flush, getComplexWriter, getCurrentInteraction, getCurrentSource, getElementCache, getInteractionsIterator, getInteractionWriter, getProcessedInteractions, getStreamWriter, getSubWritersFactory, getVersion, initialiseContext, initialiseDefaultInteractionSet, initialiseDefaultSource, initialiseSubWriters, isStarted, newXmlSource, reset, setAnnotationsWriter, setComplexWriter, setCurrentInteraction, setCurrentSource, setDefaultReleaseDate, setDefaultSource, setElementCache, setEntryAnnotations, setInteractionSet, setInteractionsIterator, setInteractionWriter, setSourceWriter, setStarted, setSubWritersFactory, setVersion, setWriteComplexesAsInteractors, start, write, write, write, writeComplexesAsInteractors, writeEndEntry, writeEndEntryContent, writeEndInteractionList, writeEntryAttributes, writeEntrySetAttributes, writeInteractionListContent, writeSource, writeStartEntry, writeStartInteractionList, writeSubComplexInEntry

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LightExpandedXmlNamedBinaryWriter

public LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version)

Constructor for LightExpandedXmlNamedBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

LightExpandedXmlNamedBinaryWriter

public LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version,
                                         File file)
                                  throws IOException,
                                         XMLStreamException

Constructor for LightExpandedXmlNamedBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

file - a File object.

Throws:

IOException - if any.

XMLStreamException - if any.

LightExpandedXmlNamedBinaryWriter

public LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version,
                                         OutputStream output)
                                  throws XMLStreamException

Constructor for LightExpandedXmlNamedBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

output - a OutputStream object.

Throws:

XMLStreamException - if any.

LightExpandedXmlNamedBinaryWriter

public LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version,
                                         Writer writer)
                                  throws XMLStreamException

Constructor for LightExpandedXmlNamedBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

writer - a Writer object.

Throws:

XMLStreamException - if any.

LightExpandedXmlNamedBinaryWriter

public LightExpandedXmlNamedBinaryWriter(PsiXmlVersion version,
                                         XMLStreamWriter streamWriter,
                                         PsiXmlObjectCache cache)

Constructor for LightExpandedXmlNamedBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

streamWriter - a XMLStreamWriter object.

cache - a PsiXmlObjectCache object.

Method Detail

initialiseSubWriters

protected void initialiseSubWriters()

initialiseSubWriters.

Specified by:

initialiseSubWriters in class AbstractXmlWriter<BinaryInteraction>