Package psidev.psi.mi.jami.xml.io.writer.expanded

Class LightExpandedXmlNamedWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter<T>

psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter<Interaction>

psidev.psi.mi.jami.xml.io.writer.expanded.LightExpandedXmlNamedWriter

All Implemented Interfaces:

InteractionWriter<Interaction>

public class LightExpandedXmlNamedWriter
extends AbstractExpandedXmlWriter<Interaction>

Expanded PSI-XML writer for light interactions (no experimental evidences) having names. Participants, experiments and features are also assumed to have expanded names

Since:

19/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
LightExpandedXmlNamedWriter(PsiXmlVersion version)	Constructor for LightExpandedXmlNamedWriter.
LightExpandedXmlNamedWriter(PsiXmlVersion version, File file)	Constructor for LightExpandedXmlNamedWriter.
LightExpandedXmlNamedWriter(PsiXmlVersion version, OutputStream output)	Constructor for LightExpandedXmlNamedWriter.
LightExpandedXmlNamedWriter(PsiXmlVersion version, Writer writer)	Constructor for LightExpandedXmlNamedWriter.
LightExpandedXmlNamedWriter(PsiXmlVersion version, XMLStreamWriter streamWriter, PsiXmlObjectCache cache)	Constructor for LightExpandedXmlNamedWriter.

Method Summary

Modifier and Type	Method	Description
protected void	initialiseSubWriters()	initialiseSubWriters.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter

getInteractionType, initialiseDefaultElementCache, initialiseOptionalWriters, writeComplex, writeInteraction, writeStartEntryContent

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter

close, end, extractSourceFromInteraction, flush, getComplexWriter, getCurrentInteraction, getCurrentSource, getElementCache, getInteractionsIterator, getInteractionWriter, getProcessedInteractions, getStreamWriter, getSubWritersFactory, getVersion, initialiseContext, initialiseDefaultInteractionSet, initialiseDefaultSource, initialiseSubWriters, isStarted, newXmlSource, reset, setAnnotationsWriter, setComplexWriter, setCurrentInteraction, setCurrentSource, setDefaultReleaseDate, setDefaultSource, setElementCache, setEntryAnnotations, setInteractionSet, setInteractionsIterator, setInteractionWriter, setSourceWriter, setStarted, setSubWritersFactory, setVersion, setWriteComplexesAsInteractors, start, write, write, write, writeComplexesAsInteractors, writeEndEntry, writeEndEntryContent, writeEndInteractionList, writeEntryAttributes, writeEntrySetAttributes, writeInteractionListContent, writeSource, writeStartEntry, writeStartInteractionList, writeSubComplexInEntry

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LightExpandedXmlNamedWriter

public LightExpandedXmlNamedWriter(PsiXmlVersion version)

Constructor for LightExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

LightExpandedXmlNamedWriter

public LightExpandedXmlNamedWriter(PsiXmlVersion version,
                                   File file)
                            throws IOException,
                                   XMLStreamException

Constructor for LightExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

file - a File object.

Throws:

IOException - if any.

XMLStreamException - if any.

LightExpandedXmlNamedWriter

public LightExpandedXmlNamedWriter(PsiXmlVersion version,
                                   OutputStream output)
                            throws XMLStreamException

Constructor for LightExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

output - a OutputStream object.

Throws:

XMLStreamException - if any.

LightExpandedXmlNamedWriter

public LightExpandedXmlNamedWriter(PsiXmlVersion version,
                                   Writer writer)
                            throws XMLStreamException

Constructor for LightExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

writer - a Writer object.

Throws:

XMLStreamException - if any.

LightExpandedXmlNamedWriter

public LightExpandedXmlNamedWriter(PsiXmlVersion version,
                                   XMLStreamWriter streamWriter,
                                   PsiXmlObjectCache cache)

Constructor for LightExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

streamWriter - a XMLStreamWriter object.

cache - a PsiXmlObjectCache object.

Method Detail

initialiseSubWriters

protected void initialiseSubWriters()

initialiseSubWriters.

Specified by:

initialiseSubWriters in class AbstractXmlWriter<Interaction>