Package psidev.psi.mi.jami.xml.model.extension.xml253

Class XmlModelledParticipantCandidate

java.lang.Object

psidev.psi.mi.jami.xml.model.extension.xml253.AbstractXmlEntity<ModelledFeature>

psidev.psi.mi.jami.xml.model.extension.xml253.XmlModelledParticipantCandidate

All Implemented Interfaces:

com.sun.xml.bind.Locatable, FileSourceContext, Entity<ModelledFeature>, ModelledEntity, ModelledParticipantCandidate, ParticipantCandidate<ModelledParticipantPool,ModelledFeature>, ExtendedPsiXmlEntity<ModelledFeature>

public class XmlModelledParticipantCandidate
extends AbstractXmlEntity<ModelledFeature>
implements ModelledParticipantCandidate

XML implementation of ModelledParticipantCandidate

Since:

08/10/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	XmlModelledParticipantCandidate.JAXBFeatureWrapper

Field Summary

Fields

Modifier and Type	Field	Description
protected Locator	locator

Constructor Summary

Constructors

Constructor	Description
XmlModelledParticipantCandidate()	Constructor for XmlModelledParticipantCandidate.
XmlModelledParticipantCandidate(Interactor interactor)	Constructor for XmlModelledParticipantCandidate.
XmlModelledParticipantCandidate(Interactor interactor, Stoichiometry stoichiometry)	Constructor for XmlModelledParticipantCandidate.

Method Summary

Modifier and Type	Method	Description
ModelledParticipantPool	getParentPool()	The participant pool parent with which the candidate is involved.
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
protected void	initialiseFeatureWrapper()	initialiseFeatureWrapper.
void	setJAXBFeatureWrapper(XmlModelledParticipantCandidate.JAXBFeatureWrapper jaxbFeatureWrapper)	setJAXBFeatureWrapper.
void	setJAXBId(int value)	setJAXBId.
void	setJAXBInteractor(DefaultXmlInteractor interactor)	setJAXBInteractor.
void	setJAXBInteractorRef(Integer value)	Sets the value of the interactorRef property.
void	setParentPool(ModelledParticipantPool pool)	Sets the participant pool parent.

Methods inherited from class psidev.psi.mi.jami.xml.model.extension.xml253.AbstractXmlEntity

addAllFeatures, addFeature, getCausalRelationships, getChangeListener, getFeatures, getId, getInteractor, getParticipantLocator, getStoichiometry, initialiseUnspecifiedInteractor, processAddedFeature, removeAllFeatures, removeFeature, setChangeListener, setFeatureWrapper, setId, setInteractor, setSourceLocator, setStoichiometry, setStoichiometry, sourceLocation, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.model.Entity

addAllFeatures, addFeature, getCausalRelationships, getChangeListener, getFeatures, getInteractor, getStoichiometry, removeAllFeatures, removeFeature, setChangeListener, setInteractor, setStoichiometry, setStoichiometry

Field Detail

locator

protected Locator locator

Constructor Detail

XmlModelledParticipantCandidate

public XmlModelledParticipantCandidate()

Constructor for XmlModelledParticipantCandidate.

XmlModelledParticipantCandidate

public XmlModelledParticipantCandidate(Interactor interactor)

Constructor for XmlModelledParticipantCandidate.

Parameters:

interactor - a Interactor object.

XmlModelledParticipantCandidate

public XmlModelledParticipantCandidate(Interactor interactor,
                                       Stoichiometry stoichiometry)

Constructor for XmlModelledParticipantCandidate.

Parameters:

interactor - a Interactor object.

stoichiometry - a Stoichiometry object.

Method Detail

setJAXBInteractor

public void setJAXBInteractor(DefaultXmlInteractor interactor)

setJAXBInteractor.

Overrides:

setJAXBInteractor in class AbstractXmlEntity<ModelledFeature>

Parameters:

interactor - a DefaultXmlInteractor object.

setJAXBInteractorRef

public void setJAXBInteractorRef(Integer value)

Sets the value of the interactorRef property.

Overrides:

setJAXBInteractorRef in class AbstractXmlEntity<ModelledFeature>

Parameters:

value - allowed object is Integer

setJAXBId

public void setJAXBId(int value)

setJAXBId.

Parameters:

value - a int.

setJAXBFeatureWrapper

public void setJAXBFeatureWrapper(XmlModelledParticipantCandidate.JAXBFeatureWrapper jaxbFeatureWrapper)

setJAXBFeatureWrapper.

Parameters:

jaxbFeatureWrapper - a XmlModelledParticipantCandidate.JAXBFeatureWrapper object.

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Overrides:

getSourceLocator in class AbstractXmlEntity<ModelledFeature>

Returns:

a FileSourceLocator object.

initialiseFeatureWrapper

protected void initialiseFeatureWrapper()

initialiseFeatureWrapper.

Overrides:

initialiseFeatureWrapper in class AbstractXmlEntity<ModelledFeature>

getParentPool

public ModelledParticipantPool getParentPool()

The participant pool parent with which the candidate is involved. It can be null if the participant candidate is not part of any participant pool. It can happen if the participant candidate has been removed from a participant pool and is now invalid.

Specified by:

getParentPool in interface ParticipantCandidate<ModelledParticipantPool,ModelledFeature>

Returns:

the participant pool parent

setParentPool

public void setParentPool(ModelledParticipantPool pool)

Sets the participant pool parent.

Specified by:

setParentPool in interface ParticipantCandidate<ModelledParticipantPool,ModelledFeature>

Parameters:

pool - : participant pool