Package psidev.psi.mi.jami.xml.model.extension.xml300

Class XmlCooperativityEvidence

java.lang.Object

psidev.psi.mi.jami.xml.model.extension.xml300.XmlCooperativityEvidence

All Implemented Interfaces:

com.sun.xml.bind.Locatable, FileSourceContext, CooperativityEvidence

public class XmlCooperativityEvidence
extends Object
implements CooperativityEvidence, FileSourceContext, com.sun.xml.bind.Locatable

Xml 3.0 implementation for cooperativity evidence

Since:

15/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	XmlCooperativityEvidence.JAXBEvidenceMethodWrapper

Constructor Summary

Constructors

Constructor	Description
XmlCooperativityEvidence()	Constructor for XmlCooperativityEvidence.
XmlCooperativityEvidence(Publication pub)	Constructor for XmlCooperativityEvidence.

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
Collection<CvTerm>	getEvidenceMethods()	getEvidenceMethods.
Publication	getPublication()	Getter for the field publication.
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
int	hashCode()
protected void	initialiseEvidenceMethods()	initialiseEvidenceMethods.
void	setJAXBEvidenceMethodWrapper(XmlCooperativityEvidence.JAXBEvidenceMethodWrapper wrapper)	setJAXBEvidenceMethodWrapper.
void	setJAXBPublication(BibRef bibRef)	setJAXBPublication.
void	setPublication(Publication publication)	Set the publication where the cooperativityEvidence has been described.
void	setSourceLocation(PsiXmlLocator sourceLocator)	setSourceLocation.
void	setSourceLocator(FileSourceLocator sourceLocator)	Sets the source locator
Locator	sourceLocation()
String	toString()	toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

XmlCooperativityEvidence

public XmlCooperativityEvidence()

Constructor for XmlCooperativityEvidence.

XmlCooperativityEvidence

public XmlCooperativityEvidence(Publication pub)

Constructor for XmlCooperativityEvidence.

Parameters:

pub - a Publication object.

Method Detail

getPublication

public Publication getPublication()

Getter for the field publication.

Specified by:

getPublication in interface CooperativityEvidence

Returns:

a Publication object.

sourceLocation

public Locator sourceLocation()

Specified by:

sourceLocation in interface com.sun.xml.bind.Locatable

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Returns:

a FileSourceLocator object.

setSourceLocator

public void setSourceLocator(FileSourceLocator sourceLocator)

Sets the source locator

Specified by:

setSourceLocator in interface FileSourceContext

Parameters:

sourceLocator - : the file locator

setSourceLocation

public void setSourceLocation(PsiXmlLocator sourceLocator)

setSourceLocation.

Parameters:

sourceLocator - a PsiXmlLocator object.

toString

public String toString()

toString

Specified by:

toString in interface FileSourceContext

Overrides:

toString in class Object

Returns:

the file source context as a String. If the source locator is not null, it should give the source locator properties

initialiseEvidenceMethods

protected void initialiseEvidenceMethods()

initialiseEvidenceMethods.

setPublication

public void setPublication(Publication publication)

Set the publication where the cooperativityEvidence has been described.

Specified by:

setPublication in interface CooperativityEvidence

Parameters:

publication - : the publication

getEvidenceMethods

public Collection<CvTerm> getEvidenceMethods()

getEvidenceMethods.

Specified by:

getEvidenceMethods in interface CooperativityEvidence

Returns:

a Collection object.

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

setJAXBPublication

public void setJAXBPublication(BibRef bibRef)

setJAXBPublication.

Parameters:

bibRef - a BibRef object.

setJAXBEvidenceMethodWrapper

public void setJAXBEvidenceMethodWrapper(XmlCooperativityEvidence.JAXBEvidenceMethodWrapper wrapper)

setJAXBEvidenceMethodWrapper.

Parameters:

wrapper - a XmlCooperativityEvidence.JAXBEvidenceMethodWrapper object.