Package psidev.psi.mi.jami.xml.model.extension.xml300

Class XmlInterval

java.lang.Object

psidev.psi.mi.jami.xml.model.extension.xml300.AbstractXmlPosition

psidev.psi.mi.jami.xml.model.extension.xml300.XmlInterval

All Implemented Interfaces:

com.sun.xml.bind.Locatable, FileSourceContext, Position

public class XmlInterval
extends AbstractXmlPosition

Xml implementation of a position which is an interval The JAXB binding is designed to be read-only and is not designed for writing

Since:

19/07/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Field Summary

Fields inherited from interface psidev.psi.mi.jami.model.Position

C_TERMINAL, C_TERMINAL_FULL, C_TERMINAL_MI, C_TERMINAL_RANGE, C_TERMINAL_RANGE_FULL, C_TERMINAL_RANGE_MI, CERTAIN, CERTAIN_FULL, CERTAIN_MI, GREATER_THAN, GREATER_THAN_FULL, GREATER_THAN_MI, LESS_THAN, LESS_THAN_FULL, LESS_THAN_MI, N_TERMINAL, N_TERMINAL_FULL, N_TERMINAL_MI, N_TERMINAL_RANGE, N_TERMINAL_RANGE_FULL, N_TERMINAL_RANGE_MI, RAGGED_N_TERMINAL, RAGGED_N_TERMINAL_MI, RANGE, RANGE_FULL, RANGE_MI, UNDETERMINED, UNDETERMINED_FULL, UNDETERMINED_MI

Constructor Summary

Constructors

Constructor	Description
XmlInterval()	Constructor for XmlInterval.
XmlInterval(CvTerm status, boolean positionUndetermined)	Constructor for XmlInterval.
XmlInterval(CvTerm status, long start, long end, boolean positionUndetermined)	Constructor for XmlInterval.

Method Summary

Modifier and Type	Method	Description
long	getEnd()	Getter for the field end.
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
long	getStart()	Getter for the field start.
CvTerm	getStatus()	Getter for the field status.
boolean	isPositionUndetermined()	isPositionUndetermined.
void	setJAXBBeginPosition(long value)	Sets the value of the begin property.
void	setJAXBEndPosition(long value)	Sets the value of the end property.
String	toString()	toString

Methods inherited from class psidev.psi.mi.jami.xml.model.extension.xml300.AbstractXmlPosition

equals, hashCode, setJAXBStatus, setSourceLocator, sourceLocation

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

XmlInterval

public XmlInterval()

Constructor for XmlInterval.

XmlInterval

public XmlInterval(CvTerm status,
                   boolean positionUndetermined)

Constructor for XmlInterval.

Parameters:

status - a CvTerm object.

positionUndetermined - a boolean.

XmlInterval

public XmlInterval(CvTerm status,
                   long start,
                   long end,
                   boolean positionUndetermined)

Constructor for XmlInterval.

Parameters:

status - a CvTerm object.

start - a long.

end - a long.

positionUndetermined - a boolean.

Method Detail

getStatus

public CvTerm getStatus()

Getter for the field status.

Specified by:

getStatus in interface Position

Overrides:

getStatus in class AbstractXmlPosition

Returns:

a CvTerm object.

getStart

public long getStart()

Getter for the field start.

Returns:

a long.

getEnd

public long getEnd()

Getter for the field end.

Returns:

a long.

isPositionUndetermined

public boolean isPositionUndetermined()

isPositionUndetermined.

Specified by:

isPositionUndetermined in interface Position

Overrides:

isPositionUndetermined in class AbstractXmlPosition

Returns:

a boolean.

setJAXBBeginPosition

public void setJAXBBeginPosition(long value)

Sets the value of the begin property.

Parameters:

value - allowed object is BigInteger

setJAXBEndPosition

public void setJAXBEndPosition(long value)

Sets the value of the end property.

Parameters:

value - allowed object is BigInteger

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Overrides:

getSourceLocator in class AbstractXmlPosition

Returns:

a FileSourceLocator object.

toString

public String toString()

toString

Specified by:

toString in interface FileSourceContext

Overrides:

toString in class AbstractXmlPosition

Returns:

the file source context as a String. If the source locator is not null, it should give the source locator properties