Package psidev.psi.mi.jami.xml.model.xml30

Class Entry

java.lang.Object

psidev.psi.mi.jami.xml.model.Entry

psidev.psi.mi.jami.xml.model.AbstractBaseEntry<T>

psidev.psi.mi.jami.xml.model.xml30.AbstractEntry<Interaction>

psidev.psi.mi.jami.xml.model.xml30.Entry

All Implemented Interfaces:

com.sun.xml.bind.Locatable, FileSourceContext

public class Entry
extends AbstractEntry<Interaction>

PSI XML 3.0 Entry implementation for JAXB read only

Since:

07/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	Entry.JAXBAvailabilitiesWrapper
static class	Entry.JAXBExperimentsWrapper
static class	Entry.JAXBInteractionsWrapper

Nested classes/interfaces inherited from class psidev.psi.mi.jami.xml.model.xml30.AbstractEntry

AbstractEntry.JAXBAnnotationsWrapper, AbstractEntry.JAXBInteractorsWrapper

Nested classes/interfaces inherited from class psidev.psi.mi.jami.xml.model.AbstractBaseEntry

AbstractBaseEntry.AbstractJAXBAnnotationsWrapper, AbstractBaseEntry.AbstractJAXBInteractionsWrapper<T>, AbstractBaseEntry.AbstractJAXBInteractorsWrapper

Constructor Summary

Constructors

Constructor	Description
Entry()

Method Summary

Modifier and Type	Method	Description
List<Experiment>	getExperiments()	getExperiments.
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
protected void	initialiseAvailabilities()	initialiseAvailabilities.
void	setJAXBAnnotationWrapper(AbstractEntry.JAXBAnnotationsWrapper wrapper)	setJAXBAnnotationWrapper.
void	setJAXBAvailabilityWrapper(Entry.JAXBAvailabilitiesWrapper wrapper)	setJAXBAvailabilityWrapper.
void	setJAXBExperimentWrapper(Entry.JAXBExperimentsWrapper wrapper)	setJAXBExperimentWrapper.
void	setJAXBInteractionsWrapper(Entry.JAXBInteractionsWrapper wrapper)	setJAXBInteractionsWrapper.
void	setJAXBInteractorsWrapper(AbstractEntry.JAXBInteractorsWrapper wrapper)	setJAXBInteractorsWrapper.
void	setJAXBSource(ExtendedPsiXmlSource source)	setJAXBSource.
void	setSourceLocator(FileSourceLocator sourceLocator)	Sets the source locator

Methods inherited from class psidev.psi.mi.jami.xml.model.AbstractBaseEntry

getInteractions, getInteractors, hasLoadedFullEntry, initialiseAnnotations, setAnnotationsWrapper, setHasLoadedFullEntry, setInteractionsWrapper, setInteractorsWrapper, sourceLocation, toString

Methods inherited from class psidev.psi.mi.jami.xml.model.Entry

getAnnotations, getAvailabilities, getSource, initialiseAnnotationsWith, initialiseAvailabilitiesWith, setSource

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

Entry

public Entry()

Method Detail

getExperiments

public List<Experiment> getExperiments()

getExperiments.

Returns:

a List object.

setJAXBSource

public void setJAXBSource(ExtendedPsiXmlSource source)

setJAXBSource.

Parameters:

source - a ExtendedPsiXmlSource object.

setJAXBAvailabilityWrapper

public void setJAXBAvailabilityWrapper(Entry.JAXBAvailabilitiesWrapper wrapper)

setJAXBAvailabilityWrapper.

Parameters:

wrapper - a Entry.JAXBAvailabilitiesWrapper object.

setJAXBExperimentWrapper

public void setJAXBExperimentWrapper(Entry.JAXBExperimentsWrapper wrapper)

setJAXBExperimentWrapper.

Parameters:

wrapper - a Entry.JAXBExperimentsWrapper object.

setJAXBInteractorsWrapper

public void setJAXBInteractorsWrapper(AbstractEntry.JAXBInteractorsWrapper wrapper)

setJAXBInteractorsWrapper.

Parameters:

wrapper - a JAXBInteractorsWrapper object.

setJAXBInteractionsWrapper

public void setJAXBInteractionsWrapper(Entry.JAXBInteractionsWrapper wrapper)

setJAXBInteractionsWrapper.

Parameters:

wrapper - a Entry.JAXBInteractionsWrapper object.

setJAXBAnnotationWrapper

public void setJAXBAnnotationWrapper(AbstractEntry.JAXBAnnotationsWrapper wrapper)

setJAXBAnnotationWrapper.

Parameters:

wrapper - a JAXBAnnotationsWrapper object.

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Overrides:

getSourceLocator in class AbstractBaseEntry<Interaction>

Returns:

a FileSourceLocator object.

setSourceLocator

public void setSourceLocator(FileSourceLocator sourceLocator)

Sets the source locator

Specified by:

setSourceLocator in interface FileSourceContext

Overrides:

setSourceLocator in class AbstractBaseEntry<Interaction>

Parameters:

sourceLocator - : the file locator

initialiseAvailabilities

protected void initialiseAvailabilities()

initialiseAvailabilities.

Overrides:

initialiseAvailabilities in class Entry