DefaultBinaryInteraction (PSI :: JAMI - Java framework for molecular interactions 3.3.0 API)

java.lang.Object
- psidev.psi.mi.jami.model.impl.AbstractInteraction<T>
- - psidev.psi.mi.jami.binary.impl.AbstractBinaryInteraction<Participant>
  - - psidev.psi.mi.jami.binary.impl.DefaultBinaryInteraction

All Implemented Interfaces:

BinaryInteraction<Participant>, Interaction<Participant>

Direct Known Subclasses:

DefaultNamedBinaryInteraction, MitabBinaryInteraction
```
public class DefaultBinaryInteraction
extends AbstractBinaryInteraction<Participant>
```
Default implementation for BinaryInteraction Note: the methods equals and hashCode have not been overridden. Use the same comparators as for DefaultInteraction
Since:
```
04/06/13
```
Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors
Constructor	Description
`DefaultBinaryInteraction()`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(String shortName)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(String shortName, CvTerm type)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(String shortName, CvTerm type, CvTerm complexExpansion)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(String shortName, CvTerm type, Participant participantA, Participant participantB)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(String shortName, CvTerm type, Participant participantA, Participant participantB, CvTerm complexExpansion)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(String shortName, Participant participantA, Participant participantB)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(String shortName, Participant participantA, Participant participantB, CvTerm complexExpansion)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(CvTerm complexExpansion)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(Participant participantA, Participant participantB)`	Constructor for DefaultBinaryInteraction.
`DefaultBinaryInteraction(Participant participantA, Participant participantB, CvTerm complexExpansion)`	Constructor for DefaultBinaryInteraction.

Method Summary
- Methods inherited from class psidev.psi.mi.jami.binary.impl.AbstractBinaryInteraction
  addAllParticipants, addParticipant, getCausalRegulatoryMechanism, getComplexExpansion, getParticipantA, getParticipantB, getParticipants, removeAllParticipants, removeParticipant, setCausalRegulatoryMechanism, setComplexExpansion, setParticipantA, setParticipantB, toString
- Methods inherited from class psidev.psi.mi.jami.model.impl.AbstractInteraction
  clearPropertiesLinkedToChecksums, getAnnotations, getChecksums, getCreatedDate, getIdentifiers, getInteractionType, getRigid, getShortName, getUpdatedDate, getXrefs, initialiseAnnotations, initialiseAnnotationsWith, initialiseChecksums, initialiseChecksumWith, initialiseIdentifiers, initialiseIdentifiersWith, initialiseParticipants, initialiseParticipantsWith, initialiseXrefs, initialiseXrefsWith, processAddedChecksumEvent, processRemovedChecksumEvent, setCreatedDate, setInteractionType, setRigid, setShortName, setUpdatedDate
- Methods inherited from class java.lang.Object
  clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
- Methods inherited from interface psidev.psi.mi.jami.model.Interaction
  getAnnotations, getChecksums, getCreatedDate, getIdentifiers, getInteractionType, getRigid, getShortName, getUpdatedDate, getXrefs, setCreatedDate, setInteractionType, setRigid, setShortName, setUpdatedDate

Constructor Detail

DefaultBinaryInteraction
```
public DefaultBinaryInteraction()
```
Constructor for DefaultBinaryInteraction.

DefaultBinaryInteraction
```
public DefaultBinaryInteraction(String shortName)
```
Constructor for DefaultBinaryInteraction.

Parameters:

shortName - a String object.

DefaultBinaryInteraction

public DefaultBinaryInteraction(String shortName,
                                CvTerm type)

Constructor for DefaultBinaryInteraction.

Parameters:: shortName - a String object.; type - a CvTerm object.

DefaultBinaryInteraction

public DefaultBinaryInteraction(Participant participantA,
                                Participant participantB)

Constructor for DefaultBinaryInteraction.

Parameters:: participantA - a Participant object.; participantB - a Participant object.

DefaultBinaryInteraction

public DefaultBinaryInteraction(String shortName,
                                Participant participantA,
                                Participant participantB)

Constructor for DefaultBinaryInteraction.

Parameters:: shortName - a String object.; participantA - a Participant object.; participantB - a Participant object.

DefaultBinaryInteraction

public DefaultBinaryInteraction(String shortName,
                                CvTerm type,
                                Participant participantA,
                                Participant participantB)

Constructor for DefaultBinaryInteraction.

Parameters:: shortName - a String object.; type - a CvTerm object.; participantA - a Participant object.; participantB - a Participant object.

DefaultBinaryInteraction
```
public DefaultBinaryInteraction(CvTerm complexExpansion)
```
Constructor for DefaultBinaryInteraction.

Parameters:

complexExpansion - a CvTerm object.

DefaultBinaryInteraction

public DefaultBinaryInteraction(String shortName,
                                CvTerm type,
                                CvTerm complexExpansion)

Constructor for DefaultBinaryInteraction.

Parameters:: shortName - a String object.; type - a CvTerm object.; complexExpansion - a CvTerm object.

DefaultBinaryInteraction

public DefaultBinaryInteraction(Participant participantA,
                                Participant participantB,
                                CvTerm complexExpansion)

Constructor for DefaultBinaryInteraction.

Parameters:: participantA - a Participant object.; participantB - a Participant object.; complexExpansion - a CvTerm object.

DefaultBinaryInteraction

public DefaultBinaryInteraction(String shortName,
                                Participant participantA,
                                Participant participantB,
                                CvTerm complexExpansion)

Constructor for DefaultBinaryInteraction.

Parameters:: shortName - a String object.; participantA - a Participant object.; participantB - a Participant object.; complexExpansion - a CvTerm object.

DefaultBinaryInteraction

public DefaultBinaryInteraction(String shortName,
                                CvTerm type,
                                Participant participantA,
                                Participant participantB,
                                CvTerm complexExpansion)

Constructor for DefaultBinaryInteraction.

Parameters:: shortName - a String object.; type - a CvTerm object.; participantA - a Participant object.; participantB - a Participant object.; complexExpansion - a CvTerm object.