Uses of Package
psidev.psi.mi.jami.bridges.fetcher
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Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.chebi Class Description AbstractCachedFetcher Abstract class for fetchersBioactiveEntityFetcher A fetcher for bioactiveEntitiesCachedFetcher An interface defining the basic interaction with the cache.InteractorFetcher Fetches the complete records which match an interactor. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.europubmedcentral Class Description AbstractCachedFetcher Abstract class for fetchersCachedFetcher An interface defining the basic interaction with the cache.PublicationFetcher The interface for fetching a publication record. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.fetcher Class Description CachedFetcher An interface defining the basic interaction with the cache.CvTermFetcher The interface for finding a CvTerm or extension of CvTerm.InteractorFetcher Fetches the complete records which match an interactor. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.fetcher.mock Class Description BioactiveEntityFetcher A fetcher for bioactiveEntitiesCvTermFetcher The interface for finding a CvTerm or extension of CvTerm.GeneFetcher A fetcher for genes.InteractorFetcher Fetches the complete records which match an interactor.OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children.OrganismFetcher Interface for fetching an organism from an external service.ProteinFetcher Fetches the complete records which match a protein.PublicationFetcher The interface for fetching a publication record.SourceFetcher Finds source Extends CvTermFetcher with source objects. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.imex Class Description PublicationFetcher The interface for fetching a publication record. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.imex.mock Class Description PublicationFetcher The interface for fetching a publication record. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.obo Class Description CvTermFetcher The interface for finding a CvTerm or extension of CvTerm.OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children.SourceFetcher Finds source Extends CvTermFetcher with source objects. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.ols Class Description AbstractCachedFetcher Abstract class for fetchersCachedFetcher An interface defining the basic interaction with the cache.CvTermFetcher The interface for finding a CvTerm or extension of CvTerm.OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children.SourceFetcher Finds source Extends CvTermFetcher with source objects. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.ontologymanager Class Description OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.ontologymanager.impl Class Description OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.ontologymanager.impl.local Class Description OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.ontologymanager.impl.ols Class Description OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.uniprot Class Description AbstractCachedFetcher Abstract class for fetchersCachedFetcher An interface defining the basic interaction with the cache.GeneFetcher A fetcher for genes.InteractorFetcher Fetches the complete records which match an interactor.ProteinFetcher Fetches the complete records which match a protein. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.uniprot.taxonomy Class Description AbstractCachedFetcher Abstract class for fetchersCachedFetcher An interface defining the basic interaction with the cache.OrganismFetcher Interface for fetching an organism from an external service. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.bridges.unisave Class Description AbstractCachedFetcher Abstract class for fetchersCachedFetcher An interface defining the basic interaction with the cache.SequenceVersionFetcher A fetcher that fetches a sequence from a specific version and/or a version from a specific sequence -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.enricher Class Description CvTermFetcher The interface for finding a CvTerm or extension of CvTerm.InteractorFetcher Fetches the complete records which match an interactor.OrganismFetcher Interface for fetching an organism from an external service.PublicationFetcher The interface for fetching a publication record. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.enricher.impl Class Description InteractorFetcher Fetches the complete records which match an interactor. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.enricher.impl.full Class Description BioactiveEntityFetcher A fetcher for bioactiveEntitiesCvTermFetcher The interface for finding a CvTerm or extension of CvTerm.GeneFetcher A fetcher for genes.InteractorFetcher Fetches the complete records which match an interactor.OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children.OrganismFetcher Interface for fetching an organism from an external service.ProteinFetcher Fetches the complete records which match a protein.PublicationFetcher The interface for fetching a publication record.SourceFetcher Finds source Extends CvTermFetcher with source objects. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.enricher.impl.minimal Class Description BioactiveEntityFetcher A fetcher for bioactiveEntitiesCvTermFetcher The interface for finding a CvTerm or extension of CvTerm.GeneFetcher A fetcher for genes.InteractorFetcher Fetches the complete records which match an interactor.OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children.OrganismFetcher Interface for fetching an organism from an external service.ProteinFetcher Fetches the complete records which match a protein.PublicationFetcher The interface for fetching a publication record.SourceFetcher Finds source Extends CvTermFetcher with source objects. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.json Class Description OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.json.binary Class Description OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.json.elements Class Description OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children. -
Classes in psidev.psi.mi.jami.bridges.fetcher used by psidev.psi.mi.jami.json.nary Class Description OntologyTermFetcher Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children.