Uses of Interface
psidev.psi.mi.jami.bridges.fetcher.CvTermFetcher

Packages that use CvTermFetcher

Package	Description
psidev.psi.mi.jami.bridges.fetcher
psidev.psi.mi.jami.bridges.fetcher.mock
psidev.psi.mi.jami.bridges.obo
psidev.psi.mi.jami.bridges.ols
psidev.psi.mi.jami.enricher
psidev.psi.mi.jami.enricher.impl.full
psidev.psi.mi.jami.enricher.impl.minimal

Uses of CvTermFetcher in psidev.psi.mi.jami.bridges.fetcher

Subinterfaces of CvTermFetcher in psidev.psi.mi.jami.bridges.fetcher

Modifier and Type	Interface	Description
interface	OntologyTermFetcher	Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children.
interface	SourceFetcher	Finds source Extends CvTermFetcher with source objects.

Uses of CvTermFetcher in psidev.psi.mi.jami.bridges.fetcher.mock

Classes in psidev.psi.mi.jami.bridges.fetcher.mock with type parameters of type CvTermFetcher

Modifier and Type	Class	Description
class	CvTermCompositeFetcherTemplate<T extends CvTerm,F extends CvTermFetcher<T>>	Template for a CvTermCompositeFetcher which delegates fetching to other fetcher

Classes in psidev.psi.mi.jami.bridges.fetcher.mock that implement CvTermFetcher

Modifier and Type	Class	Description
class	CvTermCompositeFetcherTemplate<T extends CvTerm,F extends CvTermFetcher<T>>	Template for a CvTermCompositeFetcher which delegates fetching to other fetcher
class	FailingCvTermFetcher	A mock fetcher for testing exceptions.
class	MockCvTermFetcher	A mock fetcher for testing.
class	MockOntologyTermFetcher	A mock fetcher for testing.
class	MockSourceFetcher	A mock fetcher for testing.
class	OntologyTermCompositeFetcher	Ontology fetcher that delegates to different ontologyTermFetchers
class	SourceCompositeFetcher	Source fetcher that delegates to different sourceFetchers

Uses of CvTermFetcher in psidev.psi.mi.jami.bridges.obo

Classes in psidev.psi.mi.jami.bridges.obo that implement CvTermFetcher

Modifier and Type	Class	Description
class	OboCvTermFetcher	Simple fetcher based on OBO files
class	OboFetcherTemplate<T extends CvTerm>	Template fetcher for OBO files
class	OboOntologyTermFetcher	The ontology fetcher based on OBO file
class	OboSourceFetcher	Simple fetcher based on OBO files

Uses of CvTermFetcher in psidev.psi.mi.jami.bridges.ols

Classes in psidev.psi.mi.jami.bridges.ols that implement CvTermFetcher

Modifier and Type	Class	Description
class	AbstractOlsFetcher<T extends CvTerm>	Abstract class for OlsCvTermFetcher
class	CachedOlsCvTermFetcher	Created with IntelliJ IDEA.
class	CachedOlsFetcher<T extends CvTerm>	Generic implementation for CachedOlsService
class	CachedOlsOntologyTermFetcher	Code for the cache based on the CachedOntologyService at uk.ac.ebi.intact.bridges.olslight;
class	CachedOlsSourceFetcher	Code for the cache OLS fetcher;
class	OlsCvTermFetcher	Created with IntelliJ IDEA.
class	OlsOntologyTermFetcher	Finds ontology terms in the Ontology Lookup Service as well as having options to recursively find parents and or children.
class	OlsSourceFetcher	Created with IntelliJ IDEA.

Methods in psidev.psi.mi.jami.bridges.ols that return CvTermFetcher

Modifier and Type	Method	Description
protected CvTermFetcher<T>	CachedOlsFetcher.getDelegateFetcher()	Getter for the field delegateFetcher.

Constructors in psidev.psi.mi.jami.bridges.ols with parameters of type CvTermFetcher

Constructor	Description
CachedOlsFetcher(String cacheName, CvTermFetcher<T> delegateFetcher)	Constructor for CachedOlsFetcher.

Uses of CvTermFetcher in psidev.psi.mi.jami.enricher

Methods in psidev.psi.mi.jami.enricher that return CvTermFetcher

Modifier and Type	Method	Description
CvTermFetcher<C>	CvTermEnricher.getCvTermFetcher()	The fetcher to be used for used to collect data.

Uses of CvTermFetcher in psidev.psi.mi.jami.enricher.impl.full

Methods in psidev.psi.mi.jami.enricher.impl.full that return CvTermFetcher

Modifier and Type	Method	Description
CvTermFetcher<C>	FullCvTermUpdater.getCvTermFetcher()	The fetcher to be used for used for fetcher.

Constructors in psidev.psi.mi.jami.enricher.impl.full with parameters of type CvTermFetcher

Constructor	Description
FullCvTermEnricher(CvTermFetcher<C> cvTermFetcher)	A constructor matching super.
FullCvTermUpdater(CvTermFetcher<C> cvTermFetcher)	A constructor matching super.

Uses of CvTermFetcher in psidev.psi.mi.jami.enricher.impl.minimal

Methods in psidev.psi.mi.jami.enricher.impl.minimal that return CvTermFetcher

Modifier and Type	Method	Description
CvTermFetcher<C>	MinimalCvTermEnricher.getCvTermFetcher()	The fetcher to be used for used for fetcher.
CvTermFetcher<OntologyTerm>	MinimalOntologyTermEnricher.getCvTermFetcher()	getCvTermFetcher.
CvTermFetcher<Source>	MinimalSourceEnricher.getCvTermFetcher()	getCvTermFetcher.

Constructors in psidev.psi.mi.jami.enricher.impl.minimal with parameters of type CvTermFetcher

Constructor	Description
MinimalCvTermEnricher(CvTermFetcher<C> cvTermFetcher)	A constructor matching super.
MinimalCvTermUpdater(CvTermFetcher<C> cvTermFetcher)	A constructor matching super.