| BinaryInteractionEvidenceSource |
A dataSource of binary interaction evidences
It gives full access to all the interactions using Iterator or the full collection.
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| BinaryInteractionEvidenceStream |
A Data source of binary interaction evidences giving only a stream of interactions.
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| BinaryInteractionSource<T extends BinaryInteraction> |
A Data source of binary interactions.
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| BinaryInteractionStream<T extends BinaryInteraction> |
A Data source of binary interactions giving only a stream of interactions.
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| ComplexSource |
A Data source of biological complexes.
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| ComplexStream |
A Data source of biological complexes giving only a stream of complexes.
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| CvTermStream |
A CV term data source allows to stream the controlled vocabulary terms of a given dataSource
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| ExperimentStream |
An experiment data source allows to stream the experiments of a given dataSource
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| FileSourceContext |
Some context in a file giving information about object location, etc..
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| InteractionEvidenceSource<T extends InteractionEvidence> |
A Data source of interaction evidences.
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| InteractionEvidenceStream<T extends InteractionEvidence> |
A Data source of interaction evidences giving only a stream of interactions.
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| InteractionSource<T extends Interaction> |
A Data source of interactions.
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| InteractionStream<T extends Interaction> |
A Data source of interactions giving only a stream of interactions.
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| InteractionWriter<T extends Interaction> |
The InteractionWriter can write interactions in a datasource (files, database)
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| InteractorStream<T extends Interactor> |
An interactor data source allows to stream the interactors of a given dataSource
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| MIDataSource |
A data Source in JAMI.
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| MIFileDataSource |
Interface for MIDataSource coming from a file.
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| ModelledBinaryInteractionSource |
A Data source of modelled binary interactions.
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| ModelledBinaryInteractionStream |
A Data source of modelled binary interactions giving only a stream of interactions.
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| ModelledInteractionSource<T extends ModelledInteraction> |
A Data source of modelled interactions.
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| ModelledInteractionStream<T extends ModelledInteraction> |
A Data source of modelled interaction giving only a stream of interactions.
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| OrganismStream |
An organism data source allows to stream the organisms of a given dataSource
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| PublicationStream |
A publication data source allows to stream the publications of a given dataSource
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