ProteinEnricher (PSI :: JAMI - Java framework for molecular interactions 3.3.0 API)

All Superinterfaces:

InteractorEnricher<Protein>, MIEnricher<Protein>

All Known Implementing Classes:

FullProteinEnricher, FullProteinUpdater, MinimalProteinEnricher, MinimalProteinUpdater
```
public interface ProteinEnricher
extends InteractorEnricher<Protein>
```
The Protein enricher is an enricher which can enrich either single protein or a collection. A protein enricher must be initiated with a protein fetcher. Sub enrichers: CvTerm, Organism. Additionally, the protein enricher has a protein remapper for finding dead or demerged proteins.

Since:

16/05/13

Author:

Gabriel Aldam (galdam@ebi.ac.uk)

Method Summary

All Methods Instance Methods Abstract Methods
Modifier and Type	Method	Description
`ProteinMapper`	`getProteinMapper()`	The protein remapper has no default and can be left null
`void`	`setProteinMapper(ProteinMapper mapper)`	setProteinMapper.

Methods inherited from interface psidev.psi.mi.jami.enricher.InteractorEnricher
getCvTermEnricher, getInteractorFetcher, getListener, getOrganismEnricher, setCvTermEnricher, setListener, setOrganismEnricher

Methods inherited from interface psidev.psi.mi.jami.enricher.MIEnricher
enrich, enrich, enrich

- Method Detail
  - getProteinMapper
```
ProteinMapper getProteinMapper()
```
    The protein remapper has no default and can be left null
    
    Returns:
    
    The current remapper.
  - setProteinMapper
```
void setProteinMapper(ProteinMapper mapper)
```
    setProteinMapper.
    
    Parameters:
    
    mapper - a ProteinMapper object.