Package psidev.psi.mi.jami.enricher.impl.full

Class FullInteractionUpdater<I extends Interaction>

java.lang.Object

psidev.psi.mi.jami.enricher.impl.minimal.MinimalInteractionEnricher<I>

psidev.psi.mi.jami.enricher.impl.full.FullInteractionEnricher<I>

psidev.psi.mi.jami.enricher.impl.full.FullInteractionUpdater<I>

All Implemented Interfaces:

InteractionEnricher<I>, MIEnricher<I>

public class FullInteractionUpdater<I extends Interaction>
extends FullInteractionEnricher<I>

Full updater of interaction

Since:

01/10/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Modifier	Constructor	Description
	FullInteractionUpdater()	Constructor for FullInteractionUpdater.
protected	FullInteractionUpdater(MinimalInteractionUpdater<I> delegate)	Constructor for FullInteractionUpdater.

Method Summary

Modifier and Type	Method	Description
CvTermEnricher<CvTerm>	getCvTermEnricher()	Sets the sub enricher for CvTerms.
protected MinimalInteractionUpdater<I>	getDelegate()	Getter for the field delegate.
InteractionEnricherListener<I>	getInteractionEnricherListener()	The listener for changes made to interactions.
ParticipantEnricher	getParticipantEnricher()	The current sub enricher for participants.
protected void	processAnnotations(I objectToEnrich, I objectSource)	processAnnotations.
protected void	processChecksums(I objectToEnrich, I objectSource)	processChecksums.
void	processMinimalUpdates(I objectToEnrich, I objectSource)	processMinimalUpdates.
protected void	processRigid(I interactionToEnrich)	processRigid.
protected void	processXrefs(I objectToEnrich, I objectSource)	processXrefs.
void	setCvTermEnricher(CvTermEnricher<CvTerm> cvTermEnricher)	setCvTermEnricher.
void	setInteractionEnricherListener(InteractionEnricherListener<I> listener)	setInteractionEnricherListener.
void	setParticipantEnricher(ParticipantEnricher participantEnricher)	setParticipantEnricher.

Methods inherited from class psidev.psi.mi.jami.enricher.impl.full.FullInteractionEnricher

generateRigid, getRigidGenerator, processOtherProperties, processOtherProperties

Methods inherited from class psidev.psi.mi.jami.enricher.impl.minimal.MinimalInteractionEnricher

enrich, enrich, enrich, processCreatedDate, processIdentifiers, processInteractionType, processInteractionType, processParticipants, processParticipants, processShortName, processUpdateDate

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FullInteractionUpdater

public FullInteractionUpdater()

Constructor for FullInteractionUpdater.

FullInteractionUpdater

protected FullInteractionUpdater(MinimalInteractionUpdater<I> delegate)

Constructor for FullInteractionUpdater.

Parameters:

delegate - a MinimalInteractionUpdater object.

Method Detail

processMinimalUpdates

public void processMinimalUpdates(I objectToEnrich,
                                  I objectSource)
                           throws EnricherException

processMinimalUpdates.

Overrides:

processMinimalUpdates in class MinimalInteractionEnricher<I extends Interaction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

Throws:

EnricherException - if any.

processRigid

protected void processRigid(I interactionToEnrich)
                     throws EnricherException

processRigid.

Overrides:

processRigid in class FullInteractionEnricher<I extends Interaction>

Parameters:

interactionToEnrich - a I object.

Throws:

EnricherException - if any.

processChecksums

protected void processChecksums(I objectToEnrich,
                                I objectSource)
                         throws EnricherException

processChecksums.

Overrides:

processChecksums in class FullInteractionEnricher<I extends Interaction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

Throws:

EnricherException - if any.

processXrefs

protected void processXrefs(I objectToEnrich,
                            I objectSource)
                     throws EnricherException

processXrefs.

Overrides:

processXrefs in class FullInteractionEnricher<I extends Interaction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

Throws:

EnricherException - if any.

processAnnotations

protected void processAnnotations(I objectToEnrich,
                                  I objectSource)
                           throws EnricherException

processAnnotations.

Overrides:

processAnnotations in class FullInteractionEnricher<I extends Interaction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

Throws:

EnricherException - if any.

getCvTermEnricher

public CvTermEnricher<CvTerm> getCvTermEnricher()

Sets the sub enricher for CvTerms.

Specified by:

getCvTermEnricher in interface InteractionEnricher<I extends Interaction>

Overrides:

getCvTermEnricher in class MinimalInteractionEnricher<I extends Interaction>

Returns:

The enricher for CvTerms. Can be null.

setCvTermEnricher

public void setCvTermEnricher(CvTermEnricher<CvTerm> cvTermEnricher)

setCvTermEnricher.

The current sub enricher for CvTerms.

Specified by:

setCvTermEnricher in interface InteractionEnricher<I extends Interaction>

Overrides:

setCvTermEnricher in class MinimalInteractionEnricher<I extends Interaction>

Parameters:

cvTermEnricher - a CvTermEnricher object.

setParticipantEnricher

public void setParticipantEnricher(ParticipantEnricher participantEnricher)

setParticipantEnricher.

Sets the sub enricher for participants.

Specified by:

setParticipantEnricher in interface InteractionEnricher<I extends Interaction>

Overrides:

setParticipantEnricher in class MinimalInteractionEnricher<I extends Interaction>

Parameters:

participantEnricher - a ParticipantEnricher object.

getParticipantEnricher

public ParticipantEnricher getParticipantEnricher()

The current sub enricher for participants.

Specified by:

getParticipantEnricher in interface InteractionEnricher<I extends Interaction>

Overrides:

getParticipantEnricher in class MinimalInteractionEnricher<I extends Interaction>

Returns:

The enricher for participants. Can be null.

getInteractionEnricherListener

public InteractionEnricherListener<I> getInteractionEnricherListener()

The listener for changes made to interactions.

Specified by:

getInteractionEnricherListener in interface InteractionEnricher<I extends Interaction>

Overrides:

getInteractionEnricherListener in class MinimalInteractionEnricher<I extends Interaction>

Returns:

The listener for interaction changes. Can be null.

setInteractionEnricherListener

public void setInteractionEnricherListener(InteractionEnricherListener<I> listener)

setInteractionEnricherListener.

Sets the listener to be used when interactions are changed.

Specified by:

setInteractionEnricherListener in interface InteractionEnricher<I extends Interaction>

Overrides:

setInteractionEnricherListener in class MinimalInteractionEnricher<I extends Interaction>

Parameters:

listener - a InteractionEnricherListener object.

getDelegate

protected MinimalInteractionUpdater<I> getDelegate()

Getter for the field delegate.

Returns:

a MinimalInteractionUpdater object.