Package psidev.psi.mi.jami.enricher.impl.full

Class FullParticipantUpdater<P extends Participant,F extends Feature>

java.lang.Object

psidev.psi.mi.jami.enricher.impl.minimal.MinimalEntityEnricher<P,F>

psidev.psi.mi.jami.enricher.impl.minimal.MinimalParticipantEnricher<P,F>

psidev.psi.mi.jami.enricher.impl.full.FullParticipantEnricher<P,F>

psidev.psi.mi.jami.enricher.impl.full.FullParticipantUpdater<P,F>

All Implemented Interfaces:

EntityEnricher<P,F>, MIEnricher<P>, ParticipantEnricher<P,F>

Direct Known Subclasses:

FullParticipantPoolUpdater

public class FullParticipantUpdater<P extends Participant,F extends Feature>
extends FullParticipantEnricher<P,F>

The participant enricher is an enricher which can enrich either single participant or a collection. The participant enricher has subEnrichers and no fetchers.

Since:

19/06/13

Author:

Gabriel Aldam (galdam@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
FullParticipantUpdater()

Method Summary

Modifier and Type	Method	Description
protected void	processAliases(P objectToEnrich, P objectSource)	processAliases.
protected void	processAnnotations(P objectToEnrich, P objectSource)	processAnnotations.
void	processBiologicalRole(P objectToEnrich, P objectSource)	processBiologicalRole.
protected void	processCausalRelationships(P objectToEnrich, P objectSource)	processCausalRelationships.
void	processFeatures(P objectToEnrich, P objectSource)	processFeatures.
void	processInteractor(P objectToEnrich, P objectSource)	processInteractor.
protected void	processXrefs(P objectToEnrich, P objectSource)	processXrefs.

Methods inherited from class psidev.psi.mi.jami.enricher.impl.full.FullParticipantEnricher

processOtherProperties

Methods inherited from class psidev.psi.mi.jami.enricher.impl.minimal.MinimalParticipantEnricher

enrich, getCvTermEnricher, processBiologicalRole, processOtherProperties, setCvTermEnricher

Methods inherited from class psidev.psi.mi.jami.enricher.impl.minimal.MinimalEntityEnricher

enrich, enrich, getFeatureEnricher, getInteractorEnricher, getParticipantEnricherListener, processFeatures, processInteractor, setFeatureEnricher, setInteractorEnricher, setParticipantEnricherListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.enricher.EntityEnricher

getFeatureEnricher, getInteractorEnricher, getParticipantEnricherListener, setFeatureEnricher, setInteractorEnricher, setParticipantEnricherListener

Methods inherited from interface psidev.psi.mi.jami.enricher.MIEnricher

enrich, enrich

Constructor Detail

FullParticipantUpdater

public FullParticipantUpdater()

Method Detail

processCausalRelationships

protected void processCausalRelationships(P objectToEnrich,
                                          P objectSource)
                                   throws EnricherException

processCausalRelationships.

Overrides:

processCausalRelationships in class FullParticipantEnricher<P extends Participant,F extends Feature>

Parameters:

objectToEnrich - a P object.

objectSource - a P object.

Throws:

EnricherException - if any.

processXrefs

protected void processXrefs(P objectToEnrich,
                            P objectSource)
                     throws EnricherException

processXrefs.

Overrides:

processXrefs in class FullParticipantEnricher<P extends Participant,F extends Feature>

Parameters:

objectToEnrich - a P object.

objectSource - a P object.

Throws:

EnricherException - if any.

processAnnotations

protected void processAnnotations(P objectToEnrich,
                                  P objectSource)
                           throws EnricherException

processAnnotations.

Overrides:

processAnnotations in class FullParticipantEnricher<P extends Participant,F extends Feature>

Parameters:

objectToEnrich - a P object.

objectSource - a P object.

Throws:

EnricherException - if any.

processInteractor

public void processInteractor(P objectToEnrich,
                              P objectSource)
                       throws EnricherException

processInteractor.

Overrides:

processInteractor in class MinimalParticipantEnricher<P extends Participant,F extends Feature>

Parameters:

objectToEnrich - a P object.

objectSource - a P object.

Throws:

EnricherException - if any.

processFeatures

public void processFeatures(P objectToEnrich,
                            P objectSource)
                     throws EnricherException

processFeatures.

Overrides:

processFeatures in class MinimalEntityEnricher<P extends Participant,F extends Feature>

Parameters:

objectToEnrich - a P object.

objectSource - a P object.

Throws:

EnricherException - if any.

processBiologicalRole

public void processBiologicalRole(P objectToEnrich,
                                  P objectSource)
                           throws EnricherException

processBiologicalRole.

Overrides:

processBiologicalRole in class MinimalParticipantEnricher<P extends Participant,F extends Feature>

Parameters:

objectToEnrich - a P object.

objectSource - a P object.

Throws:

EnricherException - if any.

processAliases

protected void processAliases(P objectToEnrich,
                              P objectSource)
                       throws EnricherException

processAliases.

Overrides:

processAliases in class MinimalParticipantEnricher<P extends Participant,F extends Feature>

Parameters:

objectToEnrich - a P object.

objectSource - a P object.

Throws:

EnricherException - if any.