Package psidev.psi.mi.jami.model.impl

Class DefaultResultingSequence

java.lang.Object

psidev.psi.mi.jami.model.impl.DefaultResultingSequence

All Implemented Interfaces:

ResultingSequence

public class DefaultResultingSequence
extends Object
implements ResultingSequence

Default implementation for ResultingSequence Notes: The equals and hashcode methods have been overridden to be consistent with ResultingSequenceComparator

Since:

22/05/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
DefaultResultingSequence()	Constructor for DefaultResultingSequence.
DefaultResultingSequence(String oldSequence, String newSequence)	Constructor for DefaultResultingSequence.

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
String	getNewSequence()	Getter for the field newSequence.
String	getOriginalSequence()	Getter for the field originalSequence.
Collection<Xref>	getXrefs()	Getter for the field xrefs.
int	hashCode()
protected void	initialiseXrefs()	initialiseXrefs
protected void	initialiseXrefsWith(Collection<Xref> xrefs)	initialiseXrefsWith
void	setNewSequence(String sequence)	Sets the new sequence of this object
void	setOriginalSequence(String sequence)	Sets the original sequence of this object
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

DefaultResultingSequence

public DefaultResultingSequence()

Constructor for DefaultResultingSequence.

DefaultResultingSequence

public DefaultResultingSequence(String oldSequence,
                                String newSequence)

Constructor for DefaultResultingSequence.

Parameters:

oldSequence - a String object.

newSequence - a String object.

Method Detail

initialiseXrefs

protected void initialiseXrefs()

initialiseXrefs

initialiseXrefsWith

protected void initialiseXrefsWith(Collection<Xref> xrefs)

initialiseXrefsWith

Parameters:

xrefs - a Collection object.

getNewSequence

public String getNewSequence()

Getter for the field newSequence.

Specified by:

getNewSequence in interface ResultingSequence

Returns:

a String object.

getOriginalSequence

public String getOriginalSequence()

Getter for the field originalSequence.

Specified by:

getOriginalSequence in interface ResultingSequence

Returns:

a String object.

getXrefs

public Collection<Xref> getXrefs()

Getter for the field xrefs.

Specified by:

getXrefs in interface ResultingSequence

Returns:

a Collection object.

setNewSequence

public void setNewSequence(String sequence)

Sets the new sequence of this object

Specified by:

setNewSequence in interface ResultingSequence

Parameters:

sequence - : new sequence

setOriginalSequence

public void setOriginalSequence(String sequence)

Sets the original sequence of this object

Specified by:

setOriginalSequence in interface ResultingSequence

Parameters:

sequence - : original sequence

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object