Package psidev.psi.mi.jami.model.impl

Class DefaultVariableParameter

java.lang.Object

psidev.psi.mi.jami.model.impl.DefaultVariableParameter

All Implemented Interfaces:

VariableParameter

public class DefaultVariableParameter
extends Object
implements VariableParameter

Default implementation for variableParameters Notes: The equals and hashcode methods have been overridden to be consistent with UnambiguousVariableParameterComparator

Since:

22/05/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
DefaultVariableParameter(String description)	Constructor for DefaultVariableParameter.
DefaultVariableParameter(String description, CvTerm unit)	Constructor for DefaultVariableParameter.
DefaultVariableParameter(String description, Experiment experiment)	Constructor for DefaultVariableParameter.
DefaultVariableParameter(String description, Experiment experiment, CvTerm unit)	Constructor for DefaultVariableParameter.

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
String	getDescription()	Getter for the field description.
Experiment	getExperiment()	Getter for the field experiment.
CvTerm	getUnit()	Getter for the field unit.
Collection<VariableParameterValue>	getVariableValues()	Getter for the field variableValues.
int	hashCode()
protected void	initialiseVatiableParameterValues()	initialiseVatiableParameterValues
protected void	initialiseVatiableParameterValuesWith(Collection<VariableParameterValue> paramValues)	initialiseVatiableParameterValuesWith
void	setDescription(String description)	Sets the short description of this parameter.
void	setExperiment(Experiment experiment)	Sets the experiment for this variableParameter
void	setExperimentAndAddVariableParameter(Experiment experiment)	Sets the experiment for this variableParameter and add this variableParameter to the list of variableParameters of this experiment.
void	setUnit(CvTerm unit)	Sets the unit of this variableParameter.
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

DefaultVariableParameter

public DefaultVariableParameter(String description)

Constructor for DefaultVariableParameter.

Parameters:

description - a String object.

DefaultVariableParameter

public DefaultVariableParameter(String description,
                                Experiment experiment)

Constructor for DefaultVariableParameter.

Parameters:

description - a String object.

experiment - a Experiment object.

DefaultVariableParameter

public DefaultVariableParameter(String description,
                                CvTerm unit)

Constructor for DefaultVariableParameter.

Parameters:

description - a String object.

unit - a CvTerm object.

DefaultVariableParameter

public DefaultVariableParameter(String description,
                                Experiment experiment,
                                CvTerm unit)

Constructor for DefaultVariableParameter.

Parameters:

description - a String object.

experiment - a Experiment object.

unit - a CvTerm object.

Method Detail

initialiseVatiableParameterValues

protected void initialiseVatiableParameterValues()

initialiseVatiableParameterValues

initialiseVatiableParameterValuesWith

protected void initialiseVatiableParameterValuesWith(Collection<VariableParameterValue> paramValues)

initialiseVatiableParameterValuesWith

Parameters:

paramValues - a Collection object.

getDescription

public String getDescription()

Getter for the field description.

Specified by:

getDescription in interface VariableParameter

Returns:

a String object.

setDescription

public void setDescription(String description)

Sets the short description of this parameter.

Specified by:

setDescription in interface VariableParameter

Parameters:

description - : description

getUnit

public CvTerm getUnit()

Getter for the field unit.

Specified by:

getUnit in interface VariableParameter

Returns:

a CvTerm object.

setUnit

public void setUnit(CvTerm unit)

Sets the unit of this variableParameter.

Specified by:

setUnit in interface VariableParameter

Parameters:

unit - : unit

getVariableValues

public Collection<VariableParameterValue> getVariableValues()

Getter for the field variableValues.

Specified by:

getVariableValues in interface VariableParameter

Returns:

a Collection object.

getExperiment

public Experiment getExperiment()

Getter for the field experiment.

Specified by:

getExperiment in interface VariableParameter

Returns:

a Experiment object.

setExperiment

public void setExperiment(Experiment experiment)

Sets the experiment for this variableParameter

Specified by:

setExperiment in interface VariableParameter

Parameters:

experiment - : experiment to set

setExperimentAndAddVariableParameter

public void setExperimentAndAddVariableParameter(Experiment experiment)

Sets the experiment for this variableParameter and add this variableParameter to the list of variableParameters of this experiment. If experiment is null, remove the variableParameter from the previous experiment attached to this variableParameter

Specified by:

setExperimentAndAddVariableParameter in interface VariableParameter

Parameters:

experiment - : experiment to set

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object