Package psidev.psi.mi.jami.tab.extension

Class MitabRange

java.lang.Object

psidev.psi.mi.jami.model.impl.DefaultRange

psidev.psi.mi.jami.tab.extension.MitabRange

All Implemented Interfaces:

FileSourceContext, Range

public class MitabRange
extends DefaultRange
implements FileSourceContext

Mitab extension of Range It contains a FileSourceLocator

Since:

11/06/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Field Summary

Fields inherited from interface psidev.psi.mi.jami.model.Range

C_TERMINAL_POSITION_SYMBOL, FUZZY_POSITION_SYMBOL, GREATER_THAN_POSITION_SYMBOL, LESS_THAN_POSITION_SYMBOL, N_TERMINAL_POSITION_SYMBOL, POSITION_SEPARATOR, UNDETERMINED_POSITION_SYMBOL

Constructor Summary

Constructors

Constructor	Description
MitabRange(Position start, Position end)	Constructor for MitabRange.
MitabRange(Position start, Position end, boolean isLink)	Constructor for MitabRange.
MitabRange(Position start, Position end, boolean isLink, Participant participant)	Constructor for MitabRange.
MitabRange(Position start, Position end, boolean isLink, ResultingSequence resultingSequence)	Constructor for MitabRange.
MitabRange(Position start, Position end, Participant participant)	Constructor for MitabRange.
MitabRange(Position start, Position end, ResultingSequence resultingSequence)	Constructor for MitabRange.

Method Summary

Modifier and Type	Method	Description
FileSourceLocator	getSourceLocator()	Getter for the field sourceLocator.
void	setSourceLocator(FileSourceLocator sourceLocator)	Sets the source locator
String	toString()

Methods inherited from class psidev.psi.mi.jami.model.impl.DefaultRange

equals, getEnd, getParticipant, getResultingSequence, getStart, hashCode, isLink, setLink, setParticipant, setPositions, setResultingSequence

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

MitabRange

public MitabRange(Position start,
                  Position end)

Constructor for MitabRange.

Parameters:

start - a Position object.

end - a Position object.

MitabRange

public MitabRange(Position start,
                  Position end,
                  boolean isLink)

Constructor for MitabRange.

Parameters:

start - a Position object.

end - a Position object.

isLink - a boolean.

MitabRange

public MitabRange(Position start,
                  Position end,
                  ResultingSequence resultingSequence)

Constructor for MitabRange.

Parameters:

start - a Position object.

end - a Position object.

resultingSequence - a ResultingSequence object.

MitabRange

public MitabRange(Position start,
                  Position end,
                  boolean isLink,
                  ResultingSequence resultingSequence)

Constructor for MitabRange.

Parameters:

start - a Position object.

end - a Position object.

isLink - a boolean.

resultingSequence - a ResultingSequence object.

MitabRange

public MitabRange(Position start,
                  Position end,
                  Participant participant)

Constructor for MitabRange.

Parameters:

start - a Position object.

end - a Position object.

participant - a Participant object.

MitabRange

public MitabRange(Position start,
                  Position end,
                  boolean isLink,
                  Participant participant)

Constructor for MitabRange.

Parameters:

start - a Position object.

end - a Position object.

isLink - a boolean.

participant - a Participant object.

Method Detail

getSourceLocator

public FileSourceLocator getSourceLocator()

Getter for the field sourceLocator.

Specified by:

getSourceLocator in interface FileSourceContext

Returns:

a FileSourceLocator object.

setSourceLocator

public void setSourceLocator(FileSourceLocator sourceLocator)

Sets the source locator

Specified by:

setSourceLocator in interface FileSourceContext

Parameters:

sourceLocator - : the file locator

toString

public String toString()

Specified by:

toString in interface FileSourceContext

Overrides:

toString in class DefaultRange

Returns:

the file source context as a String. If the source locator is not null, it should give the source locator properties